RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA556992" and tax_phylum = "Candidatus Delongiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Delongiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26825341 26825341 PRJNA556992_P_NODE_113461_length_390_cov_1.296530_g111275_i0 PRJNA556992 113461 390 1.29653 5.056467 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 113 1.09e-27   NR MCK5760068.1 2044594 g111275 i0 44.5 1.96923076923077 128 70 97.7 1 8 388 144 271 MCK5760068.1 class I SAM-dependent methyltransferase [Candidatus Delongbacteria bacterium] diamond 768 113 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
30520694 30520694 PRJNA556992_P_NODE_145393_length_361_cov_11.850694_g143205_i0 PRJNA556992 145393 361 11.850694 42.78100534 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 77 1.11e-14   NR MDA3819133.1 2044594 g143205 i0 41 0.972299168975069 117 62 97.2 4 3 353 59 168 MDA3819133.1 hypothetical protein [Candidatus Delongbacteria bacterium] diamond 351 77 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;