RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA556992" and tax_phylum = "Candidatus Adleribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Adleribacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9458177 9458177 PRJNA556992_P_NODE_514008_length_266_cov_1.595855_g511819_i0 PRJNA556992 514008 266 1.595855 4.2449743 Candidatus Adlerbacteria bacterium 1932010 Bacteria Bacteria 189 2.769999999999999e-55   NR MCX6819718.1 1932010 g511819 i0 95.5 0.992481203007519 88 4 99.2 0 1 264 244 331 MCX6819718.1 threonine--tRNA ligase [Candidatus Adlerbacteria bacterium] diamond 264 189 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium
28752212 28752212 PRJNA556992_P_NODE_369247_length_280_cov_1.396135_g367058_i0 PRJNA556992 369247 280 1.396135 3.909178 Candidatus Adlerbacteria bacterium 1932010 Bacteria Bacteria 104 2.29e-26   NR MDB5225537.1 1932010 g367058 i0 68.2 0.707142857142857 66 21 70.7 0 81 278 1 66 MDB5225537.1 hypothetical protein [Candidatus Adlerbacteria bacterium] diamond 198 104 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;