RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA556992" and tax_phylum = "Candidatus Absconditibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9459361 9459361 PRJNA556992_P_NODE_608908_length_258_cov_2.200000_g606719_i0 PRJNA556992 608908 258 2.2 5.676 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 110 3.35e-28   NR MFA6256485.1 2927939 g606719 i0 62.1 1.01162790697674 87 32 100 1 258 1 15 101 MFA6256485.1 class II glutamine amidotransferase [Candidatus Absconditabacterales bacterium] diamond 261 110 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
14562526 14562526 PRJNA556992_P_NODE_831872_length_244_cov_2.280702_g829682_i0 PRJNA556992 831872 244 2.280702 5.56491288 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 69.3 1.89e-12   NR AKH32733.1 1643353 g829682 i0 67.4 0.528688524590164 43 14 52.9 0 244 116 73 115 AKH32733.1 hypothetical protein XF24_00393 [candidate division SR1 bacterium Aalborg_AAW-1] diamond 129 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
27583753 27583753 PRJNA556992_P_NODE_1078984_length_217_cov_10.548611_g1076793_i0 PRJNA556992 1078984 217 10.548611 22.89048587 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 83.2 5.21e-18   NR AKH32899.1 1643353 g1076793 i0 56.3 0.981566820276498 71 30 96.8 1 7 216 32 102 AKH32899.1 hypothetical protein XF24_00570 [candidate division SR1 bacterium Aalborg_AAW-1] diamond 213 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
28594317 28594317 PRJNA556992_P_NODE_1118227_length_208_cov_7.607407_g1116036_i0 PRJNA556992 1118227 208 7.607407 15.82340656 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 60.8 5.26e-9   NR AKH33146.1 1643353 g1116036 i0 52.8 0.764423076923077 53 25 76.4 0 163 5 120 172 AKH33146.1 Methane monooxygenase component C [candidate division SR1 bacterium Aalborg_AAW-1] diamond 159 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
28942011 28942011 PRJNA556992_P_NODE_483268_length_268_cov_10.651282_g481079_i0 PRJNA556992 483268 268 10.651282 28.54543576 Candidatus Absconditicoccus praedator 2735562 Bacteria Bacteria 83.6 2.07e-16   NR WP_231180564.1 2735562 g481079 i0 58.2 1.51119402985075 67 28 75 0 63 263 367 433 WP_231180564.1 hypothetical protein [Candidatus Absconditicoccus praedator] diamond 405 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales Candidatus Absconditicoccaceae Candidatus Absconditicoccus Candidatus Absconditicoccus praedator
28973195 28973195 PRJNA556992_P_NODE_1074868_length_218_cov_10.151724_g1072677_i0 PRJNA556992 1074868 218 10.151724 22.13075832 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 78.6 6.4e-15   NR AKH33020.1 1643353 g1072677 i0 54.8 1.0045871559633 73 31 99.1 2 3 218 36 107 AKH33020.1 hypothetical protein XF24_00694 [candidate division SR1 bacterium Aalborg_AAW-1] diamond 219 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
29889297 29889297 PRJNA556992_P_NODE_78251_length_437_cov_10.843407_g76072_i0 PRJNA556992 78251 437 10.843407 47.38568859 SR1 bacterium human oral taxon HOT-345 1540874 Bacteria Bacteria 116 7.22e-28   NR RAL57243.1 1540874 g76072 i0 43.9 2.97254004576659 148 75 98.2 4 9 437 178 322 RAL57243.1 hypothetical protein BSK20_03130 [SR1 bacterium human oral taxon HOT-345] diamond 1299 116 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         SR1 bacterium human oral taxon HOT-345
30299935 30299935 PRJNA556992_P_NODE_1085572_length_216_cov_5.020979_g1083381_i0 PRJNA556992 1085572 216 5.020979 10.84531464 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 75.5 1.64e-14   NR AKH32388.1 1643353 g1083381 i0 52.9 0.972222222222222 70 33 97.2 0 2 211 104 173 AKH32388.1 Protein YceI [candidate division SR1 bacterium Aalborg_AAW-1] diamond 210 75.5 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
31058478 31058478 PRJNA556992_P_NODE_709775_length_250_cov_5.745763_g707586_i0 PRJNA556992 709775 250 5.745763 14.3644075 Candidatus Absconditabacteria bacterium 3018262 Bacteria Bacteria 52 1.07e-5   NR MEF2175655.1 3018262 g707586 i0 40.6 0.828 69 38 79.2 1 36 233 1 69 MEF2175655.1 hypothetical protein [Candidatus Absconditabacteria bacterium] diamond 207 52 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         Candidatus Absconditabacteria bacterium
31374390 31374390 PRJNA556992_P_NODE_709216_length_250_cov_7.587571_g707027_i0 PRJNA556992 709216 250 7.587571 18.9689275 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 144 2.3e-39   NR HMS90950.1 2927939 g707027 i0 82.9 0.984 82 14 98.4 0 250 5 8 89 HMS90950.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 246 144 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
31500775 31500775 PRJNA556992_P_NODE_40616_length_556_cov_2.755694_g38473_i0 PRJNA556992 40616 556 2.755694 15.32165864 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 110 6.699999999999999e-26   NR HMS90907.1 2927939 g38473 i0 50.5 0.588129496402878 109 53 58.3 1 548 225 141 249 HMS90907.1 HNH endonuclease signature motif containing protein [Candidatus Absconditabacterales bacterium] diamond 327 110 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
31595762 31595762 PRJNA556992_P_NODE_443776_length_272_cov_2.402010_g441587_i0 PRJNA556992 443776 272 2.40201 6.5334672 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 47.4 0.00119   NR AHB41182.1 1394709 g441587 i0 41.8 0.738970588235294 67 37 71.7 1 248 54 225 291 AHB41182.1 F-box associated region protein [candidate division SR1 bacterium RAAC1_SR1_1] diamond 201 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
31880276 31880276 PRJNA556992_P_NODE_941157_length_236_cov_5.343558_g938967_i0 PRJNA556992 941157 236 5.343558 12.61079688 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 108 1.6e-27   NR HMY80265.1 2927939 g938967 i0 68.4 1.86864406779661 76 24 96.6 0 2 229 47 122 HMY80265.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 441 108 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
32418191 32418191 PRJNA556992_P_NODE_453519_length_271_cov_2.747475_g451330_i0 PRJNA556992 453519 271 2.747475 7.44565725 Candidatus Vampirococcus lugosii 2789015 Bacteria Bacteria 58.2 2.06e-7   NR WP_213348134.1 2789015 g451330 i0 34.1 0.940959409594096 85 55 93 1 265 14 2124 2208 WP_213348134.1 Ig-like domain-containing alpha-2-macroglobulin family protein [Candidatus Vampirococcus lugosii] diamond 255 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota       Vampirococcus Candidatus Vampirococcus lugosii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;