RNAquarium Metadata Server
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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA556992" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 16 ✖

analysis 1

  • diamond · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10055560 10055560 PRJNA556992_P_NODE_668468_length_253_cov_3.133333_g666279_i0 PRJNA556992 668468 253 3.133333 7.92733249 root 1 Root_unresolved Root_unresolved 166 2.57e-50   NR XP_009012174.1 6412 g666279 i0 97.6 27.8893280632411 84 2 99.6 0 252 1 60 143 XP_009012174.1 hypothetical protein HELRODRAFT_92894, partial [Helobdella robusta] diamond 7056 166 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
22206038 22206038 PRJNA556992_P_NODE_455178_length_271_cov_2.191919_g452989_i0 PRJNA556992 455178 271 2.191919 5.94010049 Ridgeia piscesae 27915 Annelida Annelida 157 2.81e-43   NR KAK2159764.1 27915 g452989 i0 78.9 11.9557195571956 90 19 99.6 0 271 2 95 184 KAK2159764.1 hypothetical protein NP493_1689g00002 [Ridgeia piscesae] diamond 3240 157 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
27836491 27836491 PRJNA556992_P_NODE_407104_length_276_cov_1.379310_g404915_i0 PRJNA556992 407104 276 1.37931 3.8068956 Dimorphilus gyrociliatus 2664684 Annelida Annelida 46.6 0.00249   NR CAD5111750.1 2664684 g404915 i0 34.9 1.8695652173913 63 40 68.5 1 66 254 515 576 CAD5111750.1 DgyrCDS1029 [Dimorphilus gyrociliatus] diamond 516 46.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus
27836777 27836777 PRJNA556992_P_NODE_954984_length_235_cov_3.061728_g952794_i0 PRJNA556992 954984 235 3.061728 7.1950608 Paralvinella palmiformis 53620 Annelida Annelida 47.4 8.03e-4   NR KAK2145522.1 53620 g952794 i0 42 0.880851063829787 69 34 80.4 3 41 229 270 338 KAK2145522.1 hypothetical protein LSH36_676g00014 [Paralvinella palmiformis] diamond 207 47.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
28956303 28956303 PRJNA556992_P_NODE_523088_length_265_cov_2.276042_g520899_i0 PRJNA556992 523088 265 2.276042 6.0315113 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.1 3.83e-4   NR XP_009025746.1 6412 g520899 i0 69 10.6528301886792 29 9 32.8 0 177 263 1 29 XP_009025746.1 hypothetical protein HELRODRAFT_185092 [Helobdella robusta] diamond 2823 48.5 0.991752577319588 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
29415290 29415290 PRJNA556992_P_NODE_600329_length_259_cov_1.408602_g598140_i0 PRJNA556992 600329 259 1.408602 3.64827918 Dimorphilus gyrociliatus 2664684 Annelida Annelida 67.8 7.21e-11   NR CAD5126586.1 2664684 g598140 i0 45.2 0.845559845559846 73 38 84.6 1 258 40 1479 1549 CAD5126586.1 DgyrCDS14676 [Dimorphilus gyrociliatus] diamond 219 67.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus
29998241 29998241 PRJNA556992_P_NODE_471231_length_270_cov_1.233503_g469042_i0 PRJNA556992 471231 270 1.233503 3.3304581 Metazoa 33208 Annelida Annelida 85.5 6.09e-18   NR KAK2185374.1 27915 g469042 i0 45 7.05555555555556 80 44 88.9 0 24 263 37 116 KAK2185374.1 hypothetical protein NP493_239g09004 [Ridgeia piscesae] diamond 1905 85.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
30110355 30110355 PRJNA556992_P_NODE_965312_length_234_cov_2.850932_g963122_i0 PRJNA556992 965312 234 2.850932 6.67118088 Owenia fusiformis 6347 Annelida Annelida 54.3 2.72e-6   NR CAH1790518.1 6347 g963122 i0 41.4 0.897435897435897 70 34 89.7 2 23 232 12 74 CAH1790518.1 unnamed protein product [Owenia fusiformis] diamond 210 54.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
30300391 30300391 PRJNA556992_P_NODE_943692_length_236_cov_3.613497_g941502_i0 PRJNA556992 943692 236 3.613497 8.52785292 Paralvinella palmiformis 53620 Annelida Annelida 97.4 4.77e-22   NR KAK2143312.1 53620 g941502 i0 58.4 0.978813559322034 77 32 97.9 0 232 2 118 194 KAK2143312.1 hypothetical protein LSH36_855g01173 [Paralvinella palmiformis] diamond 231 97.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
30314544 30314544 PRJNA556992_P_NODE_283092_length_292_cov_2.063927_g280903_i0 PRJNA556992 283092 292 2.063927 6.02666684 Annelida 6340 Annelida Annelida 44.3 0.019   NR XBW67467.1 208440 g280903 i0 94.1 1.15068493150685 17 1 17.5 0 208 258 6 22 XBW67467.1 Vasa1, partial [Enchytraeus coronatus] diamond 336 44.7 0.991051454138702 Eukaryota Opisthokonta Metazoa Annelida Clitellata Enchytraeida Enchytraeidae Enchytraeus Enchytraeus coronatus
30963315 30963315 PRJNA556992_P_NODE_453434_length_271_cov_2.777778_g451245_i0 PRJNA556992 453434 271 2.777778 7.52777838 Helobdella robusta 6412 Annelida Annelida 48.5 3.64e-4   NR XP_009021949.1 6412 g451245 i0 47.5 1.7380073800738 40 21 44.3 0 120 1 156 195 XP_009021949.1 hypothetical protein HELRODRAFT_185780 [Helobdella robusta] diamond 471 48.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
31247552 31247552 PRJNA556992_P_NODE_422395_length_274_cov_2.587065_g420206_i0 PRJNA556992 422395 274 2.587065 7.0885581 Ridgeia piscesae 27915 Annelida Annelida 47 0.0016   NR KAK2182365.1 27915 g420206 i0 50 2.71532846715328 46 22 50.4 1 138 1 127 171 KAK2182365.1 hypothetical protein NP493_357g04049 [Ridgeia piscesae] diamond 744 47 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
31989385 31989385 PRJNA556992_P_NODE_1100158_length_212_cov_11.251799_g1097967_i0 PRJNA556992 1100158 212 11.251799 23.85381388 Metazoa 33208 Annelida Annelida 60.1 1.9e-8   NR KAK2166678.1 27915 g1097967 i0 44.4 4.61320754716981 63 34 87.7 1 3 188 262 324 KAK2166678.1 hypothetical protein NP493_1310g00031 [Ridgeia piscesae] diamond 978 60.5 0.993388429752066 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
32211071 32211071 PRJNA556992_P_NODE_884058_length_241_cov_4.380952_g881868_i0 PRJNA556992 884058 241 4.380952 10.55809432 root 1 Root_unresolved Root_unresolved 53.9 4.11e-6   NR KAK2175535.1 27915 g881868 i0 38.9 2.68879668049793 54 33 67.2 0 16 177 323 376 KAK2175535.1 hypothetical protein NP493_723g00003 [Ridgeia piscesae] diamond 648 53.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
32576482 32576482 PRJNA556992_P_NODE_566419_length_261_cov_4.265957_g564230_i0 PRJNA556992 566419 261 4.265957 11.13414777 Capitella teleta 283909 Annelida Annelida 48.9 2.78e-4   NR ELU03225.1 283909 g564230 i0 62.5 0.367816091954023 32 12 36.8 0 157 62 4 35 ELU03225.1 hypothetical protein CAPTEDRAFT_162057 [Capitella teleta] diamond 96 48.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
32622024 32622024 PRJNA556992_P_NODE_730760_length_249_cov_3.937500_g728571_i0 PRJNA556992 730760 249 3.9375 9.804375 Metazoa 33208 Annelida Annelida 70.1 7.25e-12   NR KAK2156536.1 27915 g728571 i0 50.9 6.31325301204819 57 28 68.7 0 77 247 261 317 KAK2156536.1 hypothetical protein NP493_1944g00015 [Ridgeia piscesae] diamond 1572 70.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;