RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA556992" and tax_phylum = "Abditibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 19 ✖

tax_kingdom 1

bioproject 1

  • PRJNA556992 · 19 ✖

analysis 1

  • diamond · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1807837 1807837 PRJNA556992_P_NODE_723322_length_250_cov_0.870056_g721133_i0 PRJNA556992 723322 250 0.870056 2.17514 Abditibacterium sp. 2109264 Bacteria Bacteria 162 1.03e-46   NR HEX9995666.1 2109264 g721133 i0 89.2 0.996 83 9 99.6 0 249 1 125 207 HEX9995666.1 Gfo/Idh/MocA family oxidoreductase [Abditibacterium sp.] diamond 249 162 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
15835238 15835238 PRJNA556992_P_NODE_737113_length_249_cov_2.028409_g734924_i0 PRJNA556992 737113 249 2.028409 5.05073841 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 163 6.199999999999999e-48   NR MBV9470481.1 2800791 g734924 i0 86.7 5 83 11 100 0 1 249 93 175 MBV9470481.1 succinate--CoA ligase subunit alpha [Abditibacteriaceae bacterium] diamond 1245 163 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
26635372 26635372 PRJNA556992_P_NODE_621961_length_257_cov_2.097826_g619772_i0 PRJNA556992 621961 257 2.097826 5.39141282 Abditibacteriota bacterium 2783868 Bacteria Bacteria 128 3.54e-32   NR BCM88312.1 2783868 g619772 i0 89.7 0.793774319066148 68 7 79.4 0 255 52 628 695 BCM88312.1 hypothetical protein IAD21_00143 [Abditibacteriota bacterium] diamond 204 128 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
26730019 26730019 PRJNA556992_P_NODE_577701_length_260_cov_6.229947_g575512_i0 PRJNA556992 577701 260 6.229947 16.1978622 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 108 4.53e-25   NR HEX8550985.1 2800791 g575512 i0 57.5 1.97307692307692 87 36 99.2 1 260 3 2259 2345 HEX8550985.1 translocation/assembly module TamB domain-containing protein [Abditibacteriaceae bacterium] diamond 513 108 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27741976 27741976 PRJNA556992_P_NODE_1010984_length_229_cov_3.865385_g1008794_i0 PRJNA556992 1010984 229 3.865385 8.85173165 Abditibacteriota bacterium 2783868 Bacteria Bacteria 43.9 0.0122   NR MDF2439826.1 2783868 g1008794 i0 47.5 0.799126637554585 61 26 72.1 1 2 166 196 256 MDF2439826.1 hypothetical protein [Abditibacteriota bacterium] diamond 183 43.9 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
27836653 27836653 PRJNA556992_P_NODE_717804_length_250_cov_2.067797_g715615_i0 PRJNA556992 717804 250 2.067797 5.1694925 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 58.2 1.13e-7   NR HEX8551957.1 2800791 g715615 i0 43.8 1.884 80 40 93.6 2 240 7 3 79 HEX8551957.1 TIM barrel protein [Abditibacteriaceae bacterium] diamond 471 58.2 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
28152351 28152351 PRJNA556992_P_NODE_1085685_length_216_cov_4.930070_g1083494_i0 PRJNA556992 1085685 216 4.93007 10.6489512 Abditibacterium sp. 2109264 Bacteria Bacteria 77 2.74e-15   NR HEX8463050.1 2109264 g1083494 i0 57.6 0.916666666666667 66 28 91.7 0 19 216 132 197 HEX8463050.1 TetR/AcrR family transcriptional regulator [Abditibacterium sp.] diamond 198 77 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
28973636 28973636 PRJNA556992_P_NODE_821888_length_245_cov_0.895349_g819698_i0 PRJNA556992 821888 245 0.895349 2.19360505 Abditibacteriota bacterium 2783868 Bacteria Bacteria 159 4.8599999999999995e-45   NR BCM91986.1 2783868 g819698 i0 86.4 0.991836734693878 81 11 99.2 0 244 2 16 96 BCM91986.1 putative teichuronic acid biosynthesis glycosyltransferase TuaH [Abditibacteriota bacterium] diamond 243 159 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
29226113 29226113 PRJNA556992_P_NODE_393669_length_277_cov_2.117647_g391480_i0 PRJNA556992 393669 277 2.117647 5.86588219 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 100 1.99e-22   NR HEY0075316.1 2800791 g391480 i0 60.4 0.985559566787004 91 32 98.6 2 3 275 73 159 HEY0075316.1 heavy metal translocating P-type ATPase [Abditibacteriaceae bacterium] diamond 273 100 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
29604176 29604176 PRJNA556992_P_NODE_1027170_length_227_cov_7.357143_g1024980_i0 PRJNA556992 1027170 227 7.357143 16.70071461 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 124 6.0000000000000005e-31   NR HEX8237544.1 2800791 g1024980 i0 78.7 0.991189427312775 75 16 99.1 0 2 226 195 269 HEX8237544.1 PAS domain S-box protein [Abditibacteriaceae bacterium] diamond 225 124 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
29604614 29604614 PRJNA556992_P_NODE_784910_length_247_cov_0.885057_g782720_i0 PRJNA556992 784910 247 0.885057 2.18609079 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 75.1 1.56e-13   NR HEX8552361.1 2800791 g782720 i0 45.6 0.959514170040486 79 43 96 0 245 9 1174 1252 HEX8552361.1 tetratricopeptide repeat protein [Abditibacteriaceae bacterium] diamond 237 75.1 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
30773897 30773897 PRJNA556992_P_NODE_651154_length_255_cov_1.285714_g648965_i0 PRJNA556992 651154 255 1.285714 3.2785707 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 100 1.29e-23   NR MBV9866827.1 2800791 g648965 i0 64 0.882352941176471 75 26 88.2 1 253 29 42 115 MBV9866827.1 DUF1559 domain-containing protein [Abditibacteriaceae bacterium] diamond 225 100 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31120894 31120894 PRJNA556992_P_NODE_574675_length_261_cov_1.563830_g572486_i0 PRJNA556992 574675 261 1.56383 4.0815963 Abditibacteriota bacterium 2783868 Bacteria Bacteria 135 8.689999999999998e-35   NR MDF2440493.1 2783868 g572486 i0 78.3 0.954022988505747 83 18 95.4 0 250 2 301 383 MDF2440493.1 hypothetical protein [Abditibacteriota bacterium] diamond 249 135 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
31596004 31596004 PRJNA556992_P_NODE_895856_length_241_cov_0.916667_g893666_i0 PRJNA556992 895856 241 0.916667 2.20916747 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 105 9.77e-25   NR MEO6907142.1 2800791 g893666 i0 83.9 4.18257261410788 56 9 69.7 0 169 2 1 56 MEO6907142.1 ribonuclease J [Abditibacteriaceae bacterium] diamond 1008 105 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31626887 31626887 PRJNA556992_P_NODE_1119356_length_208_cov_5.696296_g1117165_i0 PRJNA556992 1119356 208 5.696296 11.84829568 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 71.6 1.47e-12   NR MBV9469975.1 2800791 g1117165 i0 52.1 2.04807692307692 73 31 99.5 1 2 208 175 247 MBV9469975.1 hypothetical protein [Abditibacteriaceae bacterium] diamond 426 71.6 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31690557 31690557 PRJNA556992_P_NODE_872417_length_242_cov_1.822485_g870227_i0 PRJNA556992 872417 242 1.822485 4.4104137 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 53.9 2.21e-6   NR HEX8237835.1 2800791 g870227 i0 43.4 1.77272727272727 83 42 96.7 1 240 7 22 104 HEX8237835.1 hypothetical protein [Abditibacteriaceae bacterium] diamond 429 53.9 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31975007 31975007 PRJNA556992_P_NODE_240718_length_309_cov_2.500000_g238530_i0 PRJNA556992 240718 309 2.5 7.725 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 77 1.18e-14   NR HEX8236528.1 2800791 g238530 i0 71.4 0.475728155339806 49 14 47.6 0 309 163 129 177 HEX8236528.1 DUF1559 domain-containing protein [Abditibacteriaceae bacterium] diamond 147 77 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31975049 31975049 PRJNA556992_P_NODE_319818_length_286_cov_1.446009_g317629_i0 PRJNA556992 319818 286 1.446009 4.13558574 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 134 4.809999999999999e-37   NR HEY0076636.1 2800791 g317629 i0 66.3 0.996503496503496 95 32 99.7 0 286 2 115 209 HEY0076636.1 metal-dependent transcriptional regulator [Abditibacteriaceae bacterium] diamond 285 134 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
32165355 32165355 PRJNA556992_P_NODE_845978_length_243_cov_3.976471_g843788_i0 PRJNA556992 845978 243 3.976471 9.66282453 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 128 2.93e-33   NR MBV9868599.1 2800791 g843788 i0 82.3 2.85185185185185 79 14 97.5 0 6 242 111 189 MBV9868599.1 glycosyltransferase family 2 protein [Abditibacteriaceae bacterium] diamond 693 128 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;