RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA556842" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556842 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29320260 29320260 PRJNA556842_P_NODE_15949_length_164_cov_2.968504_g15444_i0 PRJNA556842 15949 164 2.968504 4.86834656 Harpegnathos saltator 610380 Arthropoda Arthropoda 48.5 9.78e-5   NR XP_011137057.1 610380 g15444 i0 73.3 0.548780487804878 30 8 54.9 0 157 68 1 30 XP_011137057.1 uncharacterized protein LOC105181771 [Harpegnathos saltator] diamond 90 48.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Formicidae Harpegnathos Harpegnathos saltator
29920455 29920455 PRJNA556842_P_NODE_16031_length_164_cov_1.220472_g15526_i0 PRJNA556842 16031 164 1.220472 2.00157408 Idotea baltica 82763 Arthropoda Arthropoda 70.5 3.26e-13   NR MCL4120794.1 82763 g15526 i0 63 0.98780487804878 54 20 98.8 0 164 3 138 191 MCL4120794.1 hypothetical protein [Idotea baltica] diamond 162 70.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Isopoda Idoteidae Idotea Idotea baltica
30583596 30583596 PRJNA556842_P_NODE_1193_length_965_cov_38.913793_g888_i0 PRJNA556842 1193 965 38.913793 375.51810245 Polypedilum vanderplanki 319348 Arthropoda Arthropoda 70.9 1.42e-9   NR KAG5668960.1 319348 g888 i0 35.7 0.391709844559586 126 78 38.9 3 876 502 267 390 KAG5668960.1 hypothetical protein PVAND_016866 [Polypedilum vanderplanki] diamond 378 70.9 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Polypedilum Polypedilum vanderplanki

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;