RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA551951" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA551951 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32101349 32101349 PRJNA551951_S_NODE_3798_length_469_cov_32.502304_g3684_i0 PRJNA551951 3798 469 32.502304 152.43580576 Parasteatoda tepidariorum 114398 Arthropoda Arthropoda 94.7 6.14e-22   NR XP_015922803.1 114398 g3684 i0 45.9 0.71002132196162 111 53 70.4 4 404 75 1 105 XP_015922803.1 uncharacterized protein [Parasteatoda tepidariorum] diamond 333 94.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Theridiidae Parasteatoda Parasteatoda tepidariorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;