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contig_metadata

36 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 36 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA550047 · 36 ✖

analysis 1

  • diamond · 36 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5620927 5620927 PRJNA550047_P_NODE_490325_length_233_cov_19.631250_g488352_i0 PRJNA550047 490325 233 19.63125 45.7408125 Rhodothermales bacterium 2306054 Bacteria Bacteria 135 4.569999999999999e-37   NR MBE2187622.1 2306054 g488352 i0 89.6 0.991416309012876 77 8 99.1 0 233 3 191 267 MBE2187622.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Rhodothermales bacterium] diamond 231 135 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
6223546 6223546 PRJNA550047_P_NODE_111025_length_345_cov_7.481618_g109065_i0 PRJNA550047 111025 345 7.481618 25.8115821 Rhodothermales bacterium 2306054 Bacteria Bacteria 77.8 5.76e-14   NR MEP0548289.1 2306054 g109065 i0 77.6 0.426086956521739 49 11 42.6 0 340 194 43 91 MEP0548289.1 hypothetical protein [Rhodothermales bacterium] diamond 147 77.8 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
9445580 9445580 PRJNA550047_P_NODE_503868_length_229_cov_8.275641_g501895_i0 PRJNA550047 503868 229 8.275641 18.95121789 Pseudomonadati 3379134 Bacteria Bacteria 119 3.29e-30   NR HYE58022.1 2306054 g501895 i0 76 5.86899563318777 75 16 98.3 1 228 4 62 134 HYE58022.1 hypothetical protein [Rhodothermales bacterium] diamond 1344 119 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
11991202 11991202 PRJNA550047_P_NODE_100730_length_345_cov_8.367647_g98770_i0 PRJNA550047 100730 345 8.367647 28.86838215 Bacteria 2 Bacteria Bacteria 62.4 2.08e-10   NR MBE2187084.1 2306054 g98770 i0 90.9 0.573913043478261 33 3 28.7 0 151 53 24 56 MBE2187084.1 50S ribosomal protein L33 [Rhodothermales bacterium] diamond 198 62.4 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
11994255 11994255 PRJNA550047_P_NODE_349110_length_285_cov_11.037736_g347139_i0 PRJNA550047 349110 285 11.037736 31.4575476 Rhodothermales bacterium 2306054 Bacteria Bacteria 87 1.37e-17   NR MFQ5570473.1 2306054 g347139 i0 74.6 2.47368421052632 59 15 62.1 0 177 1 1 59 MFQ5570473.1 thymidine phosphorylase [Rhodothermales bacterium] diamond 705 87 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
14542026 14542026 PRJNA550047_P_NODE_169672_length_345_cov_3.400735_g167712_i0 PRJNA550047 169672 345 3.400735 11.73253575 Rhodothermales bacterium 2306054 Bacteria Bacteria 94.4 2.57e-20   NR HLA63203.1 2306054 g167712 i0 82 0.434782608695652 50 9 43.5 0 2 151 193 242 HLA63203.1 extracellular solute-binding protein [Rhodothermales bacterium] diamond 150 94.4 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
17092721 17092721 PRJNA550047_P_NODE_336174_length_290_cov_10.032258_g334204_i0 PRJNA550047 336174 290 10.032258 29.0935482 Rhodothermales bacterium 2306054 Bacteria Bacteria 72.8 1.79e-12   NR MBE2186021.1 2306054 g334204 i0 39.3 1.15862068965517 112 46 93.1 1 6 275 684 795 MBE2186021.1 LysM peptidoglycan-binding domain-containing protein [Rhodothermales bacterium] diamond 336 72.8 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
17096231 17096231 PRJNA550047_P_NODE_76394_length_345_cov_11.253676_g74434_i0 PRJNA550047 76394 345 11.253676 38.8251822 Rhodothermales bacterium 2306054 Bacteria Bacteria 80.1 9.94e-15   NR MBE2185953.1 2306054 g74434 i0 74 0.434782608695652 50 13 43.5 0 344 195 294 343 MBE2185953.1 Ig-like domain-containing protein [Rhodothermales bacterium] diamond 150 80.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
26793282 26793282 PRJNA550047_P_NODE_377381_length_274_cov_4.582090_g375409_i0 PRJNA550047 377381 274 4.58209 12.5549266 Rhodothermales bacterium 2306054 Bacteria Bacteria 97.1 6.87e-22   NR HEX9660119.1 2306054 g375409 i0 53.4 1.95985401459854 88 37 92 1 2 253 67 154 HEX9660119.1 hypothetical protein [Rhodothermales bacterium] diamond 537 97.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
26888442 26888442 PRJNA550047_P_NODE_306841_length_296_cov_10.878924_g304872_i0 PRJNA550047 306841 296 10.878924 32.20161504 Rhodothermales bacterium 2306054 Bacteria Bacteria 124 2.24e-31   NR MDZ4701532.1 2306054 g304872 i0 65.7 7.03378378378378 99 32 98.3 1 1 291 34 132 MDZ4701532.1 MFS transporter [Rhodothermales bacterium] diamond 2082 124 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
26919973 26919973 PRJNA550047_P_NODE_486322_length_235_cov_5.975309_g484349_i0 PRJNA550047 486322 235 5.975309 14.04197615 Rhodothermales bacterium 2306054 Bacteria Bacteria 113 1.64e-27   NR HYE58434.1 2306054 g484349 i0 71.1 0.970212765957447 76 22 97 0 232 5 385 460 HYE58434.1 vitamin B12 dependent-methionine synthase activation domain-containing protein [Rhodothermales bacterium] diamond 228 113 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
26951377 26951377 PRJNA550047_P_NODE_439562_length_250_cov_12.389831_g437590_i0 PRJNA550047 439562 250 12.389831 30.9745775 Salinibacter sp. 1 2065818 Bacteria Bacteria 90.1 5.41e-21   NR WP_105014176.1 1923971 g437590 i0 62.3 0.924 77 24 86.4 2 220 5 3 79 WP_105014176.1 hypothetical protein [Salinibacter sp. 10B] diamond 231 90.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinibacter Salinibacter sp. 10B
27394368 27394368 PRJNA550047_P_NODE_443503_length_249_cov_7.397727_g441531_i0 PRJNA550047 443503 249 7.397727 18.42034023 Rhodothermales bacterium 2306054 Bacteria Bacteria 94 6.3e-21   NR HLA64346.1 2306054 g441531 i0 78.1 1.75903614457831 73 16 88 0 226 8 6 78 HLA64346.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Rhodothermales bacterium] diamond 438 94 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28120253 28120253 PRJNA550047_P_NODE_239905_length_300_cov_17.762115_g237936_i0 PRJNA550047 239905 300 17.762115 53.286345 Rhodothermales bacterium 2306054 Bacteria Bacteria 70.1 1.75e-11   NR MBE2187795.1 2306054 g237936 i0 77.6 0.49 49 11 49 0 298 152 443 491 MBE2187795.1 TonB-dependent receptor [Rhodothermales bacterium] diamond 147 70.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28625756 28625756 PRJNA550047_P_NODE_484147_length_235_cov_30.333333_g482174_i0 PRJNA550047 484147 235 30.333333 71.28333255 Rhodothermales bacterium 2306054 Bacteria Bacteria 143 1.0999999999999999e-38   NR MBE2187025.1 2306054 g482174 i0 82.9 0.970212765957447 76 13 97 0 5 232 185 260 MBE2187025.1 cytochrome c oxidase accessory protein CcoG [Rhodothermales bacterium] diamond 228 143 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28671973 28671973 PRJNA550047_P_NODE_90767_length_345_cov_9.367647_g88807_i0 PRJNA550047 90767 345 9.367647 32.31838215 Bacteria 2 Bacteria Bacteria 74.7 7.38e-13   NR MDX1532369.1 2306054 g88807 i0 78 1.30434782608696 50 11 43.5 0 1 150 376 425 MDX1532369.1 tetratricopeptide repeat protein [Rhodothermales bacterium] diamond 450 74.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28688860 28688860 PRJNA550047_P_NODE_274767_length_299_cov_7.889381_g272798_i0 PRJNA550047 274767 299 7.889381 23.58924919 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 88.2 3.56e-18   NR HEX8384661.1 2838334 g272798 i0 86.3 0.511705685618729 51 7 51.2 0 1 153 283 333 HEX8384661.1 DUF72 domain-containing protein [Rubricoccaceae bacterium] diamond 153 88.2 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
28973093 28973093 PRJNA550047_P_NODE_88568_length_345_cov_9.617647_g86608_i0 PRJNA550047 88568 345 9.617647 33.18088215 Rubrivirga marina 1196024 Bacteria Bacteria 114 1.26e-26   NR WP_095509153.1 1196024 g86608 i0 56.8 1.02608695652174 118 39 92.2 1 342 25 573 690 WP_095509153.1 vWA domain-containing protein [Rubrivirga marina] diamond 354 114 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga marina
29225772 29225772 PRJNA550047_P_NODE_513429_length_226_cov_7.555556_g511456_i0 PRJNA550047 513429 226 7.555556 17.07555656 Salinibacter ruber 146919 Bacteria Bacteria 62.8 1.61e-9   NR WP_259098248.1 146919 g511456 i0 72.5 0.530973451327434 40 11 53.1 0 122 3 14 53 WP_259098248.1 arabinofuranosidase catalytic domain-containing protein [Salinibacter ruber] diamond 120 62.8 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinibacter Salinibacter ruber
29383292 29383292 PRJNA550047_P_NODE_149589_length_345_cov_4.742647_g147629_i0 PRJNA550047 149589 345 4.742647 16.36213215 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 100 2.0099999999999994e-23   NR HEX8387252.1 2838334 g147629 i0 94 0.434782608695652 50 3 43.5 0 344 195 122 171 HEX8387252.1 UV DNA damage repair endonuclease UvsE [Rubricoccaceae bacterium] diamond 150 100 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
29414727 29414727 PRJNA550047_P_NODE_244669_length_300_cov_12.409692_g242700_i0 PRJNA550047 244669 300 12.409692 37.229076 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 55.1 3.39e-6   NR HLT46606.1 2838334 g242700 i0 82.4 0.97 34 6 34 0 199 300 3 36 HLT46606.1 HD domain-containing protein [Rubricoccaceae bacterium] diamond 291 55.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
29414893 29414893 PRJNA550047_P_NODE_590889_length_200_cov_23.023622_g588916_i0 PRJNA550047 590889 200 23.023622 46.047244 Salinivenus sp. 1885341 Bacteria Bacteria 108 1.01e-25   NR MEF8940985.1 1885341 g588916 i0 83.3 0.99 66 11 99 0 199 2 308 373 MEF8940985.1 PAS domain-containing protein [Salinivenus sp.] diamond 198 108 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinivenus Salinivenus sp.
29698706 29698706 PRJNA550047_P_NODE_512250_length_226_cov_14.183007_g510277_i0 PRJNA550047 512250 226 14.183007 32.05359582 Rhodothermales bacterium 2306054 Bacteria Bacteria 124 1.38e-33   NR MBE2186492.1 2306054 g510277 i0 81.3 0.995575221238938 75 14 99.6 0 1 225 106 180 MBE2186492.1 OmpA family protein [Rhodothermales bacterium] diamond 225 124 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
30457712 30457712 PRJNA550047_P_NODE_587313_length_201_cov_31.539062_g585340_i0 PRJNA550047 587313 201 31.539062 63.39351462 Rhodothermales bacterium 2306054 Bacteria Bacteria 86.7 7.2e-18   NR MEX1055905.1 2306054 g585340 i0 62.1 0.985074626865672 66 24 98.5 1 199 2 200 264 MEX1055905.1 sugar-binding protein [Rhodothermales bacterium] diamond 198 86.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
30709983 30709983 PRJNA550047_P_NODE_536814_length_218_cov_6.889655_g534841_i0 PRJNA550047 536814 218 6.889655 15.0194479 Salinivenus sp. 1885341 Bacteria Bacteria 55.8 6.27e-7   NR MEF8797221.1 1885341 g534841 i0 96 0.344036697247706 25 1 34.4 0 217 143 403 427 MEF8797221.1 dihydroorotase [Salinivenus sp.] diamond 75 55.8 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinivenus Salinivenus sp.
30836469 30836469 PRJNA550047_P_NODE_89454_length_345_cov_9.514706_g87494_i0 PRJNA550047 89454 345 9.514706 32.8257357 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 54.7 7.3e-6   NR MDX1419187.1 2838334 g87494 i0 72.7 0.947826086956522 33 9 28.7 0 2 100 444 476 MDX1419187.1 UDP-N-acetylmuramate--L-alanine ligase [Rubricoccaceae bacterium] diamond 327 54.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
31088980 31088980 PRJNA550047_P_NODE_128495_length_345_cov_6.154412_g126535_i0 PRJNA550047 128495 345 6.154412 21.2327214 Rhodothermales bacterium 2306054 Bacteria Bacteria 94.4 9.9e-20   NR HLA64052.1 2306054 g126535 i0 47.8 0.982608695652174 113 45 98.3 1 4 342 513 611 HLA64052.1 thioredoxin domain-containing protein [Rhodothermales bacterium] diamond 339 94.4 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
31166746 31166746 PRJNA550047_P_NODE_94455_length_345_cov_8.981618_g92495_i0 PRJNA550047 94455 345 8.981618 30.9865821 Rubrivirga 1434037 Bacteria Bacteria 58.9 5.27e-8   NR WP_095514213.1 1961794 g92495 i0 59.2 1.2695652173913 49 20 42.6 0 341 195 28 76 WP_095514213.1 pantetheine-phosphate adenylyltransferase [Rubrivirga sp. SAORIC476] diamond 438 58.9 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. SAORIC476
31310275 31310275 PRJNA550047_P_NODE_329155_length_292_cov_12.616438_g327185_i0 PRJNA550047 329155 292 12.616438 36.83999896 Rhodothermales bacterium 2306054 Bacteria Bacteria 146 9.68e-39   NR MBE2185595.1 2306054 g327185 i0 72.2 0.996575342465753 97 27 99.7 0 291 1 10 106 MBE2185595.1 long-chain fatty acid--CoA ligase [Rhodothermales bacterium] diamond 291 146 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
31532032 31532032 PRJNA550047_P_NODE_518656_length_224_cov_9.298013_g516683_i0 PRJNA550047 518656 224 9.298013 20.82754912 Salinivenus sp. 1885341 Bacteria Bacteria 91.3 2.4e-19   NR MEF8939878.1 1885341 g516683 i0 88.5 0.696428571428571 52 6 69.6 0 223 68 77 128 MEF8939878.1 PA14 domain-containing protein [Salinivenus sp.] diamond 156 91.3 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinivenus Salinivenus sp.
31689825 31689825 PRJNA550047_P_NODE_294837_length_298_cov_2.742222_g292868_i0 PRJNA550047 294837 298 2.742222 8.17182156 Rhodothermales bacterium 2306054 Bacteria Bacteria 144 2.2599999999999996e-41   NR MBE2186224.1 2306054 g292868 i0 63.2 1.06711409395973 106 32 99.7 1 297 1 62 167 MBE2186224.1 DUF1684 domain-containing protein [Rhodothermales bacterium] diamond 318 144 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
31784556 31784556 PRJNA550047_P_NODE_109837_length_345_cov_7.573529_g107877_i0 PRJNA550047 109837 345 7.573529 26.12867505 Rhodothermaceae bacterium TMED1 2026787 Bacteria Bacteria 87 8.01e-18   NR RPF78504.1 1986665 g107877 i0 64.7 1.20869565217391 68 22 59.1 1 129 332 177 242 RPF78504.1 MAG: hypothetical protein CBC65_010425 [Rhodothermaceae bacterium TMED105] diamond 417 87 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium TMED105
31816392 31816392 PRJNA550047_P_NODE_343457_length_287_cov_25.990654_g341487_i0 PRJNA550047 343457 287 25.990654 74.59317698 Rhodothermales bacterium 2306054 Bacteria Bacteria 79 4.37e-15   NR MBE2187149.1 2306054 g341487 i0 68.4 0.59581881533101 57 18 59.6 0 2 172 142 198 MBE2187149.1 DUF58 domain-containing protein [Rhodothermales bacterium] diamond 171 79 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
32354708 32354708 PRJNA550047_P_NODE_53479_length_345_cov_18.382353_g51519_i0 PRJNA550047 53479 345 18.382353 63.41911785 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 96.7 1.27e-22   NR HLT47166.1 2838334 g51519 i0 89.6 1.6695652173913 48 5 41.7 0 345 202 59 106 HLT47166.1 YbaN family protein [Rubricoccaceae bacterium] diamond 576 96.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
32747865 32747865 PRJNA550047_P_NODE_179720_length_345_cov_2.595588_g177760_i0 PRJNA550047 179720 345 2.595588 8.9547786 Pseudomonadati 3379134 Bacteria Bacteria 61.2 5.88e-9   NR WP_072715783.1 633813 g177760 i0 66.7 1.42608695652174 45 14 39.1 1 15 149 1 44 WP_072715783.1 thiol-disulfide oxidoreductase DCC family protein [Rhodothermus profundi] diamond 492 61.2 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae Rhodothermus Rhodothermus profundi
32873767 32873767 PRJNA550047_P_NODE_436520_length_251_cov_12.679775_g434548_i0 PRJNA550047 436520 251 12.679775 31.82623525 Pseudomonadati 3379134 Bacteria Bacteria 86.7 8.83e-18   NR MFQ5569662.1 2306054 g434548 i0 51.9 2.7609561752988 81 39 96.8 0 244 2 4 84 MFQ5569662.1 glycosyltransferase family 4 protein [Rhodothermales bacterium] diamond 693 86.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;