RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA550047 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27204309 27204309 PRJNA550047_P_NODE_41842_length_368_cov_4.237288_g39887_i0 PRJNA550047 41842 368 4.237288 15.59321984 Lysoka partiti-like virus 2169481 Viruses Viruses 101 3.27e-22   NR AWV67005.1 2169481 g39887 i0 79.7 0.480978260869565 59 12 48.1 0 368 192 43 101 AWV67005.1 RdRp, partial [Lysoka partiti-like virus] diamond 177 101 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Lysoka partiti-like virus
28909332 28909332 PRJNA550047_P_NODE_208068_length_318_cov_4.975510_g206100_i0 PRJNA550047 208068 318 4.97551 15.8221218 Lysoka partiti-like virus 2169481 Viruses Viruses 92.4 2.64e-19   NR AWV67005.1 2169481 g206100 i0 50 0.905660377358491 96 42 86.8 3 2 277 367 460 AWV67005.1 RdRp, partial [Lysoka partiti-like virus] diamond 288 92.4 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Lysoka partiti-like virus
29730298 29730298 PRJNA550047_P_NODE_25390_length_448_cov_15.338667_g23477_i0 PRJNA550047 25390 448 15.338667 68.71722816 Lysoka partiti-like virus 2169481 Viruses Viruses 136 2.17e-34   NR AWV67004.1 2169481 g23477 i0 39 1.37276785714286 205 65 97.1 2 11 445 329 533 AWV67004.1 RdRp, partial [Lysoka partiti-like virus] diamond 615 136 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Lysoka partiti-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;