RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_phylum = "Candidatus Microgenomatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Microgenomatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA550047 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13875630 13875630 PRJNA550047_P_NODE_4711_length_852_cov_18.424904_g3204_i0 PRJNA550047 4711 852 18.424904 156.98018208 root 1 Root_unresolved Root_unresolved 74.7 4.62e-13   NR KUK78904.1 1641390 g3204 i0 57.8 0.433098591549296 64 27 22.5 0 423 232 28 91 KUK78904.1 MAG: hypothetical protein XD95_0717 [Microgenomates bacterium 39_7] diamond 369 74.7 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         Microgenomates bacterium 39_7
31405434 31405434 PRJNA550047_P_NODE_388796_length_269_cov_9.709184_g386824_i0 PRJNA550047 388796 269 9.709184 26.11770496 Candidatus Microgenomates bacterium 2093373 Bacteria Bacteria 142 1.31e-38   NR MBI3888087.1 2093373 g386824 i0 75.6 4.75092936802974 86 21 95.9 0 268 11 305 390 MBI3888087.1 phosphoglycerate kinase [Candidatus Microgenomates bacterium] diamond 1278 142 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         Candidatus Microgenomates bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;