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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA550047 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1120167 1120167 PRJNA550047_P_NODE_17561_length_506_cov_11.722864_g15676_i0 PRJNA550047 17561 506 11.722864 59.31769184 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 217 1.7700000000000002e-64   NR MBI4530408.1 2053570 g15676 i0 48.6 1.67193675889328 282 31 99.6 2 1 504 67 348 MBI4530408.1 efflux RND transporter permease subunit [Candidatus Latescibacterota bacterium] diamond 846 217 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
19642123 19642123 PRJNA550047_P_NODE_38956_length_379_cov_12.173203_g37005_i0 PRJNA550047 38956 379 12.173203000000001 46.13643937 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 114 1.68e-28   NR NKB70023.1 2053570 g37005 i0 87.7 7.49604221635884 57 7 45.1 0 323 153 1 57 NKB70023.1 alpha/beta fold hydrolase [Candidatus Latescibacterota bacterium] diamond 2841 114 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29351790 29351790 PRJNA550047_P_NODE_299169_length_297_cov_9.736607_g297200_i0 PRJNA550047 299169 297 9.736607 28.91772279 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 47 0.00228   NR MCB9513815.1 2053570 g297200 i0 41.2 0.515151515151515 51 30 51.5 0 207 55 474 524 MCB9513815.1 ATP-dependent helicase [Candidatus Latescibacterota bacterium] diamond 153 47 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
30109669 30109669 PRJNA550047_P_NODE_454212_length_245_cov_19.372093_g452239_i0 PRJNA550047 454212 245 19.372093 47.46162785 Candidatus Latescibacter sp. 3015206 Bacteria Bacteria 133 6.159999999999998e-35   NR MDP2982856.1 3015206 g452239 i0 67.5 0.979591836734694 80 26 98 0 245 6 199 278 MDP2982856.1 hypothetical protein [Candidatus Latescibacter sp.] diamond 240 133 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota       Candidatus Latescibacter Candidatus Latescibacter sp.
30236029 30236029 PRJNA550047_P_NODE_329312_length_292_cov_11.621005_g327342_i0 PRJNA550047 329312 292 11.621005 33.9333346 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 92.4 2.35e-19   NR MBI4550895.1 2053570 g327342 i0 54.7 2.75342465753425 86 37 88.4 1 292 35 546 629 MBI4550895.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Latescibacterota bacterium] diamond 804 92.4 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
30583300 30583300 PRJNA550047_P_NODE_143093_length_345_cov_5.165441_g141133_i0 PRJNA550047 143093 345 5.165441 17.82077145 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 44.3 0.0329   NR MCK5527333.1 2053570 g141133 i0 45.7 0.4 46 25 40 0 149 12 418 463 MCK5527333.1 metallophosphoesterase [Candidatus Latescibacterota bacterium] diamond 138 44.3 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;