RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA550047 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27155583 27155583 PRJNA550047_P_NODE_159302_length_345_cov_4.117647_g157342_i0 PRJNA550047 159302 345 4.117647 14.20588215 Metazoa 33208 Annelida Annelida 67.4 2.01e-10   NR KAK2149284.1 53620 g157342 i0 32.1 2.75652173913043 106 66 87 1 309 10 90 195 KAK2149284.1 hypothetical protein LSH36_457g02068 [Paralvinella palmiformis] diamond 951 67.8 0.994100294985251 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
30015058 30015058 PRJNA550047_P_NODE_558951_length_210_cov_20.394161_g556978_i0 PRJNA550047 558951 210 20.394161 42.8277381 Owenia fusiformis 6347 Annelida Annelida 43.1 0.017   NR CAH1800216.1 6347 g556978 i0 42 0.714285714285714 50 29 71.4 0 208 59 102 151 CAH1800216.1 unnamed protein product [Owenia fusiformis] diamond 150 43.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;