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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 29 ✖

bioproject 1

  • PRJNA550047 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26888404 26888404 PRJNA550047_P_NODE_231961_length_301_cov_5.399123_g229992_i0 PRJNA550047 231961 301 5.399123 16.25136023 Thermosphaera sp. 2831947 Archaea Archaea 59.3 1.03e-7   NR MEM4655254.1 2831947 g229992 i0 60 0.996677740863787 50 20 49.8 0 150 299 22 71 MEM4655254.1 flippase [Thermosphaera sp.] diamond 300 59.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Thermosphaera Thermosphaera sp.
26920032 26920032 PRJNA550047_P_NODE_81402_length_345_cov_10.511029_g79442_i0 PRJNA550047 81402 345 10.511029 36.26305005 Candidatus Nitrosocosmicus sp. 2109671 Archaea Archaea 56.6 5.45e-8   NR HEY0580314.1 2109671 g79442 i0 53.1 0.426086956521739 49 23 42.6 0 5 151 15 63 HEY0580314.1 hypothetical protein [Candidatus Nitrosocosmicus sp.] diamond 147 56.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
27331042 27331042 PRJNA550047_P_NODE_307603_length_296_cov_9.210762_g305634_i0 PRJNA550047 307603 296 9.210762 27.26385552 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 84.7 1.6e-18   NR HSE99861.1 2169593 g305634 i0 84 0.506756756756757 50 8 50.7 0 294 145 12 61 HSE99861.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 150 84.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27520508 27520508 PRJNA550047_P_NODE_537143_length_218_cov_5.537931_g535170_i0 PRJNA550047 537143 218 5.537931 12.07268958 Nitrososphaera sp. 1971748 Archaea Archaea 91.3 1.45e-19   NR HEY1247631.1 1971748 g535170 i0 71.7 0.825688073394495 60 15 82.6 1 38 217 75 132 HEY1247631.1 glutamyl-tRNA reductase [Nitrososphaera sp.] diamond 180 91.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
27835996 27835996 PRJNA550047_P_NODE_258744_length_300_cov_5.607930_g256775_i0 PRJNA550047 258744 300 5.60793 16.82379 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 70.1 1.48e-11   NR HEX5186615.1 2169593 g256775 i0 73.3 0.45 45 12 45 0 285 151 130 174 HEX5186615.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 135 70.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27994235 27994235 PRJNA550047_P_NODE_55805_length_345_cov_16.875000_g53845_i0 PRJNA550047 55805 345 16.875 58.21875 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 90.5 6.43e-19   NR HZI71006.1 2169593 g53845 i0 93.9 0.852173913043478 49 3 42.6 0 343 197 242 290 HZI71006.1 cache domain-containing protein [Nitrososphaeraceae archaeon] diamond 294 90.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
28057133 28057133 PRJNA550047_P_NODE_474225_length_239_cov_7.391566_g472252_i0 PRJNA550047 474225 239 7.391566 17.66584274 Candidatus Nitrosotenuis sp. 2507556 Archaea Archaea 57.4 2.15e-7   NR MEM2159669.1 2507556 g472252 i0 46.9 1.21757322175732 49 26 61.5 0 93 239 75 123 MEM2159669.1 hypothetical protein [Candidatus Nitrosotenuis sp.] diamond 291 57.4 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp.
28214818 28214818 PRJNA550047_P_NODE_345726_length_287_cov_2.584112_g343756_i0 PRJNA550047 345726 287 2.584112 7.41640144 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 84 8.28e-17   NR HEY7571105.1 2169593 g343756 i0 78.8 0.543554006968641 52 11 54.4 0 1 156 270 321 HEY7571105.1 glycosyltransferase [Nitrososphaeraceae archaeon] diamond 156 84 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
28246465 28246465 PRJNA550047_P_NODE_410206_length_261_cov_6.170213_g408234_i0 PRJNA550047 410206 261 6.170213 16.10425593 Nitrososphaerota archaeon 2026795 Archaea Archaea 46.6 0.0017   NR MEM3062443.1 2026795 g408234 i0 38.5 1.70114942528736 78 45 89.7 1 25 258 122 196 MEM3062443.1 hypothetical protein [Nitrososphaerota archaeon] diamond 444 46.6 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28625792 28625792 PRJNA550047_P_NODE_555227_length_212_cov_5.482014_g553254_i0 PRJNA550047 555227 212 5.482014 11.62186968 Candidatus Nitrosotenuis sp. 2507556 Archaea Archaea 94.4 2.6800000000000003e-21   NR HXE72956.1 2507556 g553254 i0 70 0.990566037735849 70 21 99.1 0 2 211 149 218 HXE72956.1 hypothetical protein [Candidatus Nitrosotenuis sp.] diamond 210 94.4 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp.
28814664 28814664 PRJNA550047_P_NODE_300348_length_297_cov_8.080357_g298379_i0 PRJNA550047 300348 297 8.080357 23.99866029 Pyrobaculum aerophilum 13773 Archaea Archaea 186 3.74e-57   NR WP_116420834.1 13773 g298379 i0 98.9 0.888888888888889 88 1 88.9 0 265 2 60 147 WP_116420834.1 hypothetical protein [Pyrobaculum aerophilum] diamond 264 186 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
28909324 28909324 PRJNA550047_P_NODE_187948_length_344_cov_13.047970_g185987_i0 PRJNA550047 187948 344 13.04797 44.8850168 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 97.8 3.1600000000000003e-21   NR HZD82773.1 2169593 g185987 i0 98 0.427325581395349 49 1 42.7 0 342 196 359 407 HZD82773.1 glycosyltransferase [Nitrososphaeraceae archaeon] diamond 147 97.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
29036296 29036296 PRJNA550047_P_NODE_543548_length_215_cov_28.204225_g541575_i0 PRJNA550047 543548 215 28.204225 60.63908375 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 70.9 3.06e-12   NR HYC23350.1 3045160 g541575 i0 74.4 1.63255813953488 39 10 54.4 0 99 215 44 82 HYC23350.1 sulfatase [Candidatus Bathyarchaeia archaeon] diamond 351 70.9 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
29099089 29099089 PRJNA550047_P_NODE_155328_length_345_cov_4.375000_g153368_i0 PRJNA550047 155328 345 4.375 15.09375 Thermoproteota archaeon 2056631 Archaea Archaea 56.6 1.5e-6   NR MCR8454875.1 2056631 g153368 i0 55.3 0.843478260869565 47 21 40.9 0 11 151 234 280 MCR8454875.1 methionine adenosyltransferase [Thermoproteota archaeon] diamond 291 56.6 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
29288408 29288408 PRJNA550047_P_NODE_287129_length_298_cov_10.471111_g285160_i0 PRJNA550047 287129 298 10.471111 31.20391078 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 88.2 5.71e-19   NR MEM4408254.1 2972665 g285160 i0 77.3 0.906040268456376 44 10 44.3 0 166 297 1 44 MEM4408254.1 hypothetical protein [Candidatus Caldarchaeum sp.] diamond 270 88.2 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
29351939 29351939 PRJNA550047_P_NODE_6789_length_708_cov_11.436220_g5143_i0 PRJNA550047 6789 708 11.43622 80.9684376 Nitrososphaera sp. 1971748 Archaea Archaea 101 3.659999999999999e-23   NR HEX2558401.1 1971748 g5143 i0 38.6 0.538135593220339 127 75 53.4 3 591 214 8 132 HEX2558401.1 hypothetical protein [Nitrososphaera sp.] diamond 381 101 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
29604037 29604037 PRJNA550047_P_NODE_471990_length_240_cov_4.526946_g470017_i0 PRJNA550047 471990 240 4.526946 10.8646704 Candidatus Nitrosocosmicus sp. 2109671 Archaea Archaea 135 3.07e-38   NR HEY0579987.1 2109671 g470017 i0 82.3 0.9875 79 14 98.8 0 1 237 106 184 HEY0579987.1 ZIP family metal transporter [Candidatus Nitrosocosmicus sp.] diamond 237 135 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
29667168 29667168 PRJNA550047_P_NODE_50130_length_345_cov_22.610294_g48170_i0 PRJNA550047 50130 345 22.610294 78.0055143 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 97.4 5.17e-22   NR HZD82342.1 2169593 g48170 i0 98 0.426086956521739 49 1 42.6 0 3 149 183 231 HZD82342.1 SDR family oxidoreductase [Nitrososphaeraceae archaeon] diamond 147 97.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30204180 30204180 PRJNA550047_P_NODE_383672_length_271_cov_10.505051_g381700_i0 PRJNA550047 383672 271 10.505051 28.46868821 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 175 9.92e-51   NR HLN34937.1 2169593 g381700 i0 97.8 1.97047970479705 89 2 98.5 0 269 3 122 210 HLN34937.1 thiolase family protein [Nitrososphaeraceae archaeon] diamond 534 175 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30598155 30598155 PRJNA550047_P_NODE_228353_length_301_cov_7.013158_g226384_i0 PRJNA550047 228353 301 7.013158 21.10960558 root 1 Root_unresolved Root_unresolved 93.6 2.2700000000000003e-22   NR HEY0579924.1 2109671 g226384 i0 86 1.99335548172757 50 7 49.8 0 300 151 21 70 HEY0579924.1 signal recognition particle subunit SRP19/SEC65 family protein [Candidatus Nitrosocosmicus sp.] diamond 600 94 0.995744680851064 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
30661495 30661495 PRJNA550047_P_NODE_406693_length_262_cov_10.449735_g404721_i0 PRJNA550047 406693 262 10.449735 27.3783057 Thermoproteati 1783275 Archaea Archaea 97.8 7.03e-24   NR MDQ3974997.1 2056631 g404721 i0 82.1 2.42748091603053 56 10 64.1 0 93 260 1 56 MDQ3974997.1 glycine cleavage system protein GcvH [Thermoproteota archaeon] diamond 636 97.8 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
30741585 30741585 PRJNA550047_P_NODE_467454_length_241_cov_12.130952_g465481_i0 PRJNA550047 467454 241 12.130952 29.23559432 Sulfolobus sp. 2288 Archaea Archaea 44.7 0.00642   NR MCI4456318.1 2288 g465481 i0 34.8 0.821576763485477 66 40 78.4 1 224 36 24 89 MCI4456318.1 DNA polymerase sliding clamp [Sulfolobus sp.] diamond 198 44.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus sp.
31089089 31089089 PRJNA550047_P_NODE_349855_length_285_cov_6.721698_g347884_i0 PRJNA550047 349855 285 6.721698 19.1568393 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 72 6.29e-13   NR MEM4343191.1 2972665 g347884 i0 73.3 2.84210526315789 45 12 47.4 0 285 151 152 196 MEM4343191.1 hydantoinase B/oxoprolinase family protein [Candidatus Caldarchaeum sp.] diamond 810 72 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
31278719 31278719 PRJNA550047_P_NODE_48395_length_345_cov_34.628676_g46435_i0 PRJNA550047 48395 345 34.628676 119.4689322 Candidatus Nitrosopolaris sp. 3069383 Archaea Archaea 50.1 2.73e-4   NR HYV57709.1 3069383 g46435 i0 59.2 0.426086956521739 49 20 42.6 0 4 150 18 66 HYV57709.1 type II secretion system minor pseudopilin GspK [Candidatus Nitrosopolaris sp.] diamond 147 50.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosopolaris Candidatus Nitrosopolaris sp.
31483517 31483517 PRJNA550047_P_NODE_532096_length_219_cov_17.732877_g530123_i0 PRJNA550047 532096 219 17.732877 38.83500063 root 1 Root_unresolved Root_unresolved 70.9 3.38e-12   NR MDP6303927.1 2026808 g530123 i0 49.3 3.83561643835616 69 35 94.5 0 210 4 121 189 MDP6303927.1 reverse transcriptase family protein [Candidatus Nitrosopelagicus sp.] diamond 840 71.6 0.990223463687151 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosopelagicus Candidatus Nitrosopelagicus sp.
31531986 31531986 PRJNA550047_P_NODE_428816_length_254_cov_7.950276_g426844_i0 PRJNA550047 428816 254 7.950276 20.19370104 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 118 1.1999999999999999e-32   NR MDW3679887.1 2169593 g426844 i0 91 2.42125984251969 67 6 79.1 0 52 252 1 67 MDW3679887.1 cyclic pyranopterin monophosphate synthase MoaC [Nitrososphaeraceae archaeon] diamond 615 118 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32322919 32322919 PRJNA550047_P_NODE_102479_length_345_cov_8.216912_g100519_i0 PRJNA550047 102479 345 8.216912 28.3483464 Nitrosopumilus sp. 2024843 Archaea Archaea 51.2 8.12e-6   NR WP_278974723.1 2024843 g100519 i0 59.5 0.678260869565217 42 17 36.5 0 195 320 37 78 WP_278974723.1 ParB N-terminal domain-containing protein [Nitrosopumilus sp.] diamond 234 51.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
32385963 32385963 PRJNA550047_P_NODE_236479_length_301_cov_3.135965_g234510_i0 PRJNA550047 236479 301 3.135965 9.43925465 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 98.6 1.56e-24   NR HYZ95869.1 2169593 g234510 i0 94.1 3.58803986710963 51 3 50.8 0 12 164 1 51 HYZ95869.1 malate dehydrogenase [Nitrososphaeraceae archaeon] diamond 1080 98.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32859190 32859190 PRJNA550047_P_NODE_480760_length_237_cov_4.128049_g478787_i0 PRJNA550047 480760 237 4.128049 9.78347613 Nitrososphaerales archaeon 2268197 Archaea Archaea 97.1 3.48e-22   NR MEM3085102.1 2268197 g478787 i0 57.7 0.987341772151899 78 32 98.7 1 1 234 197 273 MEM3085102.1 hypothetical protein [Nitrososphaerales archaeon] diamond 234 97.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;