RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA550047 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28183241 28183241 PRJNA550047_P_NODE_305846_length_296_cov_13.883408_g303877_i0 PRJNA550047 305846 296 13.883408 41.09488768 Marseillevirus LCMAC1 2506603 Viruses Viruses 48.5 6.06e-4   NR QBK86209.1 2506603 g303877 i0 45.8 0.486486486486487 48 26 48.6 0 226 83 267 314 QBK86209.1 MAG: hypothetical protein LCMAC102_00030 [Marseillevirus LCMAC102] diamond 144 48.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC102
29983356 29983356 PRJNA550047_P_NODE_486011_length_235_cov_7.358025_g484038_i0 PRJNA550047 486011 235 7.358025 17.29135875 Acanthamoeba polyphaga moumouvirus 1269028 Viruses Viruses 41.6 0.0112   NR YP_007354512.1 1269028 g484038 i0 58.6 0.370212765957447 29 11 35.7 1 152 235 11 39 YP_007354512.1 hypothetical protein H012_gp383 [Acanthamoeba polyphaga moumouvirus] diamond 87 41.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus moumou
30741639 30741639 PRJNA550047_P_NODE_57634_length_345_cov_15.963235_g55674_i0 PRJNA550047 57634 345 15.963235 55.07316075 Lake Baikal virophage 16 3086121 Viruses Viruses 48.1 0.00143   NR WPF46888.1 3086121 g55674 i0 56.8 0.321739130434783 37 15 32.2 1 8 118 186 221 WPF46888.1 MAG: hypothetical protein [Lake Baikal virophage 16] diamond 111 48.1 1 Viruses   Bamfordvirae Preplasmiviricota Virophaviricetes Priklausovirales Lavidaviridae   Lake Baikal virophage 16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;