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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 18 ✖

bioproject 1

  • PRJNA550047 · 18 ✖

analysis 1

  • diamond · 18 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5616841 5616841 PRJNA550047_P_NODE_156145_length_345_cov_4.327206_g154185_i0 PRJNA550047 156145 345 4.327206 14.9288607 Bacteria 2 Bacteria Bacteria 58.9 1.28e-8   NR MCH8842216.1 2024889 g154185 i0 52 1.7304347826087 50 24 43.5 0 151 2 47 96 MCH8842216.1 antibiotic biosynthesis monooxygenase [SAR324 cluster bacterium] diamond 597 58.9 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
17094540 17094540 PRJNA550047_P_NODE_484534_length_235_cov_17.197531_g482561_i0 PRJNA550047 484534 235 17.197531 40.41419785 Myxococcota 2818505 Bacteria Bacteria 135 5.76e-36   NR OLC90403.1 1805117 g482561 i0 92.3 4.97872340425532 78 6 99.6 0 2 235 102 179 OLC90403.1 MAG: hypothetical protein AUJ03_01280 [Deltaproteobacteria bacterium 13_1_40CM_3_71_4] diamond 1170 135 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium 13_1_40CM_3_71_4
24739389 24739389 PRJNA550047_P_NODE_185060_length_344_cov_21.594096_g183100_i0 PRJNA550047 185060 344 21.594096 74.28369024 Myxococcota 2818505 Bacteria Bacteria 83.2 2.19e-16   NR OLC90735.1 1805117 g183100 i0 69.4 1.73546511627907 49 15 42.7 0 344 198 190 238 OLC90735.1 MAG: hypothetical protein AUJ03_00505 [Deltaproteobacteria bacterium 13_1_40CM_3_71_4] diamond 597 83.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium 13_1_40CM_3_71_4
27488958 27488958 PRJNA550047_P_NODE_462003_length_243_cov_7.400000_g460030_i0 PRJNA550047 462003 243 7.4 17.982 Deltaproteobacteria bacterium RIFCSPLOWO2_ 2026735 Bacteria Bacteria 138 1.02e-35   NR OGQ53910.1 1797882 g460030 i0 84.8 3.92592592592593 79 12 97.5 0 3 239 511 589 OGQ53910.1 MAG: hypothetical protein A3J24_07170 [Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8] diamond 954 138 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8
27551761 27551761 PRJNA550047_P_NODE_308064_length_296_cov_8.264574_g306095_i0 PRJNA550047 308064 296 8.264574 24.46313904 Persicimonas sp. 2766932 Bacteria Bacteria 69.7 2.28e-11   NR MFP4600325.1 2766932 g306095 i0 66 0.506756756756757 50 17 50.7 0 145 294 214 263 MFP4600325.1 hypothetical protein [Persicimonas sp.] diamond 150 69.7 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Bradymonadaceae Persicimonas Persicimonas sp.
27551778 27551778 PRJNA550047_P_NODE_347104_length_286_cov_8.286385_g345133_i0 PRJNA550047 347104 286 8.286385 23.6990611 Deltaproteobacteria bacterium 13_1_4 2026735 Bacteria Bacteria 173 1.16e-50   NR OLC71229.1 1805121 g345133 i0 83.2 1.99300699300699 95 16 99.7 0 2 286 88 182 OLC71229.1 MAG: hypothetical protein AUH83_16125 [Deltaproteobacteria bacterium 13_1_40CM_4_68_19] diamond 570 173 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium 13_1_40CM_4_68_19
27678520 27678520 PRJNA550047_P_NODE_173044_length_345_cov_3.147059_g171084_i0 PRJNA550047 173044 345 3.147059 10.85735355 Deltaproteobacteria bacterium RIFOXYD2_FULL_66_9 1797907 Bacteria Bacteria 66.2 1.06e-10   NR OGR21289.1 1797907 g171084 i0 65.3 0.852173913043478 49 17 42.6 0 344 198 19 67 OGR21289.1 MAG: hypothetical protein A2559_00820 [Deltaproteobacteria bacterium RIFOXYD2_FULL_66_9] diamond 294 66.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RIFOXYD2_FULL_66_9
28040418 28040418 PRJNA550047_P_NODE_526585_length_221_cov_14.209459_g524612_i0 PRJNA550047 526585 221 14.209459 31.40290439 Myxococcota 2818505 Bacteria Bacteria 70.9 3.38e-12   NR OGQ10590.1 1797848 g524612 i0 59.2 1.92760180995475 71 29 96.4 0 220 8 430 500 OGQ10590.1 MAG: hypothetical protein A2138_07565 [Deltaproteobacteria bacterium RBG_16_71_12] diamond 426 70.9 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RBG_16_71_12
28214786 28214786 PRJNA550047_P_NODE_275206_length_299_cov_7.592920_g273237_i0 PRJNA550047 275206 299 7.59292 22.7028308 Lujinxingiaceae bacterium 2946527 Bacteria Bacteria 80.1 4.87e-15   NR MBA2662048.1 2946527 g273237 i0 82 0.501672240802676 50 9 50.2 0 1 150 382 431 MBA2662048.1 MFS transporter [Lujinxingiaceae bacterium] diamond 150 80.1 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Lujinxingiaceae   Lujinxingiaceae bacterium
29099201 29099201 PRJNA550047_P_NODE_368428_length_277_cov_13.215686_g366457_i0 PRJNA550047 368428 277 13.215686 36.60745022 Deltaproteobacteria bacterium GWA2_55_1 2026735 Bacteria Bacteria 65.1 9.95e-11   NR OGP19504.1 1797809 g366457 i0 53.4 0.790613718411552 73 27 79.1 1 57 275 5 70 OGP19504.1 MAG: hypothetical protein A2054_01345 [Deltaproteobacteria bacterium GWA2_55_10] diamond 219 65.1 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium GWA2_55_10
30140967 30140967 PRJNA550047_P_NODE_596312_length_199_cov_7.944444_g594339_i0 PRJNA550047 596312 199 7.944444 15.80944356 Deltaproteobacteria bacterium HGW-Deltaproteobacteria-8 2013758 Bacteria Bacteria 112 6.0100000000000005e-27   NR PKN07903.1 2013758 g594339 i0 83.3 3.97989949748744 66 11 99.5 0 2 199 167 232 PKN07903.1 MAG: DNA methyltransferase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-8] diamond 792 112 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium HGW-Deltaproteobacteria-8
30282746 30282746 PRJNA550047_P_NODE_399272_length_265_cov_8.838542_g397300_i0 PRJNA550047 399272 265 8.838542 23.4221363 Bacteria 2 Bacteria Bacteria 123 8.789999999999999e-32   NR OYV72578.1 1970506 g397300 i0 73.6 1.9811320754717 87 23 98.5 0 2 262 132 218 OYV72578.1 MAG: N4-gp56 family major capsid protein [Deltaproteobacteria bacterium 21-66-5] diamond 525 123 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium 21-66-5
30678182 30678182 PRJNA550047_P_NODE_346993_length_286_cov_8.938967_g345022_i0 PRJNA550047 346993 286 8.938967 25.56544562 Deltaproteobacteria bacterium 21-66-5 1970506 Bacteria Bacteria 127 5.48e-33   NR OYV72578.1 1970506 g345022 i0 68.4 2.98951048951049 95 30 99.7 0 1 285 45 139 OYV72578.1 MAG: N4-gp56 family major capsid protein [Deltaproteobacteria bacterium 21-66-5] diamond 855 127 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium 21-66-5
31578248 31578248 PRJNA550047_P_NODE_550416_length_213_cov_14.500000_g548443_i0 PRJNA550047 550416 213 14.5 30.885 Myxococcota 2818505 Bacteria Bacteria 84.7 3.91e-17   NR PKN50023.1 2013748 g548443 i0 73.2 9.56338028169014 56 15 78.9 0 40 207 1 56 PKN50023.1 MAG: type VI secretion system ATPase TssH, partial [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20] diamond 2037 85.1 0.995299647473561 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20
31626687 31626687 PRJNA550047_P_NODE_49516_length_345_cov_24.272059_g47556_i0 PRJNA550047 49516 345 24.272059 83.73860355 Deltaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_9 1797867 Bacteria Bacteria 67.4 2.59e-10   NR OGQ34140.1 1797867 g47556 i0 59.2 1.6695652173913 49 20 42.6 0 344 198 322 370 OGQ34140.1 MAG: oligopeptide-binding protein oppA [Deltaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_9] diamond 576 67.4 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_9
32069574 32069574 PRJNA550047_P_NODE_417518_length_258_cov_9.686486_g415546_i0 PRJNA550047 417518 258 9.686486 24.99113388 Microvenator marinus 2600177 Bacteria Bacteria 86.3 2.13e-17   NR WP_146959159.1 2600177 g415546 i0 50 1 86 38 95.3 3 247 2 468 552 WP_146959159.1 choice-of-anchor D domain-containing protein [Microvenator marinus] diamond 258 86.3 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Microvenatoraceae Microvenator Microvenator marinus
32259755 32259755 PRJNA550047_P_NODE_393598_length_267_cov_11.927835_g391626_i0 PRJNA550047 393598 267 11.927835 31.84731945 Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12 1973967 Bacteria Bacteria 63.9 3.38e-11   NR PJB35771.1 1973967 g391626 i0 69 0.471910112359551 42 13 47.2 0 265 140 26 67 PJB35771.1 MAG: DNA-binding protein [Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12] diamond 126 63.9 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12
32417715 32417715 PRJNA550047_P_NODE_320859_length_294_cov_8.674208_g318889_i0 PRJNA550047 320859 294 8.674208 25.50217152 Deltaproteobacteria bacterium PRO3 2575691 Bacteria Bacteria 79 1.29e-14   NR MDL1870712.1 2575691 g318889 i0 69.6 0.887755102040816 46 14 46.9 0 5 142 815 860 MDL1870712.1 sensor histidine kinase KdpD [Deltaproteobacteria bacterium PRO3] diamond 261 79 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium PRO3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;