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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 25 ✖

bioproject 1

  • PRJNA550047 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10717236 10717236 PRJNA550047_P_NODE_159829_length_345_cov_4.084559_g157869_i0 PRJNA550047 159829 345 4.084559 14.09172855 root 1 Root_unresolved Root_unresolved 82.4 1.15e-15   NR GBF88336.1 307507 g157869 i0 80 3.91304347826087 50 10 43.5 0 3 152 314 363 GBF88336.1 cysteine synthase [Raphidocelis subcapitata] diamond 1350 82.8 0.995169082125604 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
15819093 15819093 PRJNA550047_P_NODE_432233_length_253_cov_4.483333_g430261_i0 PRJNA550047 432233 253 4.483333 11.34283249 Trebouxia sp. C 2796353 Plants Plants 104 9.289999999999999e-24   NR KAL3157954.1 3373145 g430261 i0 68.1 0.818181818181818 69 22 81.8 0 250 44 401 469 KAL3157954.1 hypothetical protein ABBQ32_012355 [Trebouxia sp. C0010 RCD-2024] diamond 207 104 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
22192707 22192707 PRJNA550047_P_NODE_390678_length_268_cov_16.158974_g388706_i0 PRJNA550047 390678 268 16.158974 43.30605032 Tetrabaena socialis 47790 Plants Plants 117 2.4699999999999997e-30   NR PNH12586.1 47790 g388706 i0 62.5 5.91044776119403 88 33 98.5 0 266 3 80 167 PNH12586.1 DNA-directed RNA polymerase II subunit RPB2 [Tetrabaena socialis] diamond 1584 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
26602914 26602914 PRJNA550047_P_NODE_112101_length_345_cov_7.393382_g110141_i0 PRJNA550047 112101 345 7.393382 25.5071679 Symbiochloris irregularis 706552 Plants Plants 72 6.66e-12   NR KAK9797386.1 706552 g110141 i0 63.8 0.408695652173913 47 17 40.9 0 339 199 244 290 KAK9797386.1 hypothetical protein WJX73_009647 [Symbiochloris irregularis] diamond 141 72 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
26776504 26776504 PRJNA550047_P_NODE_540721_length_216_cov_22.188811_g538748_i0 PRJNA550047 540721 216 22.188811 47.92783176 Chlamydomonas 3052 Plants Plants 85.5 2.26e-17   NR KAG2440908.1 51695 g538748 i0 59.2 3.90277777777778 71 29 98.6 0 214 2 463 533 KAG2440908.1 hypothetical protein HXX76_003761 [Chlamydomonas incerta] diamond 843 85.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
26888461 26888461 PRJNA550047_P_NODE_356721_length_282_cov_9.196172_g354750_i0 PRJNA550047 356721 282 9.196172 25.93320504 Prototheca wickerhamii 3111 Plants Plants 108 5.22e-25   NR KAK2078324.1 3111 g354750 i0 100 0.563829787234043 53 0 56.4 0 2 160 129 181 KAK2078324.1 hypothetical protein QBZ16_004193 [Prototheca wickerhamii] diamond 159 108 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
27282559 27282559 PRJNA550047_P_NODE_57663_length_345_cov_15.948529_g55703_i0 PRJNA550047 57663 345 15.948529 55.02242505 Trebouxia 13786 Plants Plants 45.4 0.0121   NR KAA6414375.1 2608996 g55703 i0 80 0.869565217391304 25 5 21.7 0 148 74 336 360 KAA6414375.1 MAG: hypothetical protein FRX49_13683 [Trebouxia sp. A1-2] diamond 300 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
27836116 27836116 PRJNA550047_P_NODE_490984_length_233_cov_12.600000_g489011_i0 PRJNA550047 490984 233 12.6 29.358 Ulva flexuosa 83791 Plants Plants 107 7.05e-25   NR AZP40192.1 83791 g489011 i0 67.1 0.978540772532189 76 25 97.9 0 232 5 159 234 AZP40192.1 hypothetical protein [Ulva flexuosa] diamond 228 107 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva flexuosa
28372753 28372753 PRJNA550047_P_NODE_133746_length_345_cov_5.790441_g131786_i0 PRJNA550047 133746 345 5.790441 19.97702145 Monoraphidium neglectum 145388 Plants Plants 46.6 0.00504   NR XP_013895436.1 145388 g131786 i0 50 0.817391304347826 46 22 40 1 140 3 11 55 XP_013895436.1 hypothetical protein MNEG_11545 [Monoraphidium neglectum] diamond 282 46.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
28404536 28404536 PRJNA550047_P_NODE_383746_length_271_cov_10.020202_g381774_i0 PRJNA550047 383746 271 10.020202 27.15474742 Tetradesmus obliquus 3088 Plants Plants 60.8 2.23e-8   NR WIA28747.1 3088 g381774 i0 65.8 0.420664206642066 38 13 42.1 0 264 151 91 128 WIA28747.1 hypothetical protein OEZ86_011281 [Tetradesmus obliquus] diamond 114 60.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
28909516 28909516 PRJNA550047_P_NODE_597408_length_198_cov_27.640000_g595435_i0 PRJNA550047 597408 198 27.64 54.7272 Coccomyxa sp. Obi 2315456 Plants Plants 46.6 1.39e-4   NR BDA48992.1 2315456 g595435 i0 54.5 0.666666666666667 44 20 66.7 0 8 139 49 92 BDA48992.1 hypothetical protein COCOBI_13-1020 [Coccomyxa sp. Obi] diamond 132 46.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
29193957 29193957 PRJNA550047_P_NODE_186789_length_344_cov_15.191882_g184828_i0 PRJNA550047 186789 344 15.191882 52.26007408 Bryopsis sp. KO-2 3115439 Plants Plants 63.5 3.39e-9   NR GMH34917.1 3041901 g184828 i0 53.2 0.409883720930233 47 22 41 0 3 143 147 193 GMH34917.1 hypothetical protein BSKO_02778 [Bryopsis sp. KO-2023] diamond 141 63.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
29351934 29351934 PRJNA550047_P_NODE_599989_length_198_cov_6.752000_g598016_i0 PRJNA550047 599989 198 6.752 13.36896 Coccomyxa viridis 1274662 Plants Plants 55.1 9.04e-7   NR CAL5221844.1 1274662 g598016 i0 69.4 0.545454545454545 36 10 54.5 1 3 110 481 515 CAL5221844.1 g4103 [Coccomyxa viridis] diamond 108 55.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
29509457 29509457 PRJNA550047_P_NODE_239090_length_300_cov_19.625551_g237121_i0 PRJNA550047 239090 300 19.625551 58.876653 Dunaliella salina 3046 Plants Plants 43.5 0.0381   NR KAF5834351.1 3046 g237121 i0 57.6 0.33 33 12 31 1 124 32 229 261 KAF5834351.1 hypothetical protein DUNSADRAFT_9014 [Dunaliella salina] diamond 99 43.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
29509583 29509583 PRJNA550047_P_NODE_496750_length_231_cov_14.265823_g494777_i0 PRJNA550047 496750 231 14.265823 32.95405113 Symbiochloris irregularis 706552 Plants Plants 116 1.79e-30   NR KAK9808432.1 706552 g494777 i0 75 0.987012987012987 76 19 98.7 0 229 2 96 171 KAK9808432.1 hypothetical protein WJX73_004832 [Symbiochloris irregularis] diamond 228 116 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
30267987 30267987 PRJNA550047_P_NODE_432052_length_253_cov_5.394444_g430080_i0 PRJNA550047 432052 253 5.394444 13.64794332 Chlorella vulgaris 3077 Plants Plants 102 4.169999999999999e-23   NR KAI3424684.1 3077 g430080 i0 54.3 0.960474308300395 81 37 96 0 245 3 456 536 KAI3424684.1 hypothetical protein D9Q98_008074 [Chlorella vulgaris] diamond 243 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
31026107 31026107 PRJNA550047_P_NODE_500555_length_230_cov_9.178344_g498582_i0 PRJNA550047 500555 230 9.178344 21.1101912 [Myrmecia] bisecta 41462 Plants Plants 42.7 0.0322   NR KAK9810336.1 41462 g498582 i0 63.6 0.991304347826087 33 12 43 0 4 102 264 296 KAK9810336.1 hypothetical protein WJX72_008917 [[Myrmecia] bisecta] diamond 228 42.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
31151907 31151907 PRJNA550047_P_NODE_340215_length_289_cov_4.328704_g338245_i0 PRJNA550047 340215 289 4.328704 12.50995456 Volvox africanus 51714 Plants Plants 77 5.97e-14   NR GLI60693.1 51714 g338245 i0 50 0.747404844290657 72 36 74.7 0 217 2 854 925 GLI60693.1 hypothetical protein VaNZ11_002897 [Volvox africanus] diamond 216 77 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
31373704 31373704 PRJNA550047_P_NODE_151676_length_345_cov_4.617647_g149716_i0 PRJNA550047 151676 345 4.617647 15.93088215 Chlamydomonas eustigma 1157962 Plants Plants 58.5 3.34e-7   NR GAX81521.1 1157962 g149716 i0 58 0.434782608695652 50 21 43.5 0 3 152 492 541 GAX81521.1 hypothetical protein CEUSTIGMA_g8949.t1 [Chlamydomonas eustigma] diamond 150 58.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
31468825 31468825 PRJNA550047_P_NODE_573796_length_206_cov_6.413534_g571823_i0 PRJNA550047 573796 206 6.413534 13.21188004 Coccomyxa sp. Obi 2315456 Plants Plants 54.7 1.41e-6   NR BDA43931.1 2315456 g571823 i0 70.6 1.98058252427184 34 10 49.5 0 205 104 297 330 BDA43931.1 Chloride transport protein 6 [Coccomyxa sp. Obi] diamond 408 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
31595354 31595354 PRJNA550047_P_NODE_495676_length_232_cov_4.018868_g493703_i0 PRJNA550047 495676 232 4.018868 9.32377376 Coccomyxa viridis 1274662 Plants Plants 134 2.33e-34   NR CAL5221045.1 1274662 g493703 i0 81.3 3.9051724137931 75 14 97 0 8 232 354 428 CAL5221045.1 g3168 [Coccomyxa viridis] diamond 906 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
31753145 31753145 PRJNA550047_P_NODE_346097_length_286_cov_17.868545_g344126_i0 PRJNA550047 346097 286 17.868545 51.1040387 Micractinium conductrix 554055 Plants Plants 64.3 1.63e-9   NR PSC67415.1 554055 g344126 i0 64.6 2.16083916083916 48 17 50.3 0 176 33 497 544 PSC67415.1 Regulator of telomere elongation helicase 1 [Micractinium conductrix] diamond 618 64.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
31816438 31816438 PRJNA550047_P_NODE_435697_length_252_cov_0.865922_g433725_i0 PRJNA550047 435697 252 0.865922 2.18212344 [Myrmecia] bisecta 41462 Plants Plants 52.8 1.24e-5   NR KAK9818037.1 41462 g433725 i0 56.8 2.61904761904762 44 19 52.4 0 134 3 788 831 KAK9818037.1 hypothetical protein WJX72_006047 [[Myrmecia] bisecta] diamond 660 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
32133076 32133076 PRJNA550047_P_NODE_527238_length_221_cov_10.189189_g525265_i0 PRJNA550047 527238 221 10.189189 22.51810769 Coccomyxa viridis 1274662 Plants Plants 51.6 1.17e-5   NR CAL5227277.1 1274662 g525265 i0 46.2 1.41176470588235 52 28 70.6 0 158 3 94 145 CAL5227277.1 g10208 [Coccomyxa viridis] diamond 312 51.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
32890597 32890597 PRJNA550047_P_NODE_547040_length_214_cov_17.666667_g545067_i0 PRJNA550047 547040 214 17.666667 37.80666738 Prototheca wickerhamii 3111 Plants Plants 119 2.01e-29   NR KAK2080282.1 3111 g545067 i0 100 0.827102803738318 59 0 82.7 0 21 197 57 115 KAK2080282.1 hypothetical protein QBZ16_000135 [Prototheca wickerhamii] diamond 177 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;