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contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA550047" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 30 ✖

bioproject 1

  • PRJNA550047 · 30 ✖

analysis 1

  • diamond · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26697989 26697989 PRJNA550047_P_NODE_151401_length_345_cov_4.636029_g149441_i0 PRJNA550047 151401 345 4.636029 15.99430005 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 50.1 3.17e-4   NR PRP83808.1 1890364 g149441 i0 44 0.434782608695652 50 28 43.5 0 1 150 265 314 PRP83808.1 SH2 domain-containing protein [Planoprotostelium fungivorum] diamond 150 50.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26888391 26888391 PRJNA550047_P_NODE_198441_length_343_cov_10.833333_g196480_i0 PRJNA550047 198441 343 10.833333 37.15833219 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 53.9 1.4e-5   NR PRP76172.1 1890364 g196480 i0 51 0.428571428571429 49 16 42.9 1 3 149 540 580 PRP76172.1 hypothetical protein PROFUN_15333 [Planoprotostelium fungivorum] diamond 147 53.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27046601 27046601 PRJNA550047_P_NODE_568782_length_207_cov_16.679104_g566809_i0 PRJNA550047 568782 207 16.679104 34.52574528 Coremiostelium polycephalum 142831 Evosea other_Eukaryota 74.7 1.28e-13   NR AOE43159.1 142831 g566809 i0 72 3.6231884057971 50 14 72.5 0 150 1 594 643 AOE43159.1 putative acetyl-CoA synthetase [Coremiostelium polycephalum] diamond 750 74.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales   Coremiostelium Coremiostelium polycephalum
27109423 27109423 PRJNA550047_P_NODE_238882_length_300_cov_20.198238_g236913_i0 PRJNA550047 238882 300 20.198238 60.594714 Polysphondylium violaceum 133409 Evosea other_Eukaryota 55.5 2.68e-6   NR KAF2072405.1 133409 g236913 i0 62.5 0.98 40 15 40 0 273 154 2544 2583 KAF2072405.1 hypothetical protein CYY_006280 [Polysphondylium violaceum] diamond 294 55.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
27457366 27457366 PRJNA550047_P_NODE_140583_length_345_cov_5.330882_g138623_i0 PRJNA550047 140583 345 5.330882 18.3915429 Protostelium mycophagum 472931 Evosea other_Eukaryota 99 1.38e-21   NR ATE46691.1 472931 g138623 i0 84 0.434782608695652 50 8 43.5 0 345 196 192 241 ATE46691.1 NADH dehydrogenase subunit 2 [Protostelium mycophagum] diamond 150 99 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
27773317 27773317 PRJNA550047_P_NODE_77684_length_345_cov_11.051471_g75724_i0 PRJNA550047 77684 345 11.051471 38.12757495 Heterostelium album PN5 2086695 Evosea other_Eukaryota 52.4 5.14e-5   NR XP_020428233.1 670386 g75724 i0 47.1 3.02608695652174 51 25 42.6 1 199 345 128 178 XP_020428233.1 protein kinase [Heterostelium album PN500] diamond 1044 52.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
27804827 27804827 PRJNA550047_P_NODE_456784_length_245_cov_1.947674_g454811_i0 PRJNA550047 456784 245 1.947674 4.7718013 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 70.5 6.61e-12   NR XP_636808.1 352472 g454811 i0 54.2 2.88979591836735 59 27 72.2 0 206 30 407 465 XP_636808.1 leucine-rich repeat-containing protein [Dictyostelium discoideum AX4] diamond 708 70.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
28025710 28025710 PRJNA550047_P_NODE_381765_length_272_cov_7.502513_g379793_i0 PRJNA550047 381765 272 7.502513 20.40683536 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 72.4 1.75e-12   NR XP_629909.1 352472 g379793 i0 50.7 1.65441176470588 75 21 81.6 2 269 48 32 91 XP_629909.1 peptidase S10 family protein [Dictyostelium discoideum AX4] diamond 450 72.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
28152149 28152149 PRJNA550047_P_NODE_443765_length_249_cov_6.062500_g441793_i0 PRJNA550047 443765 249 6.0625 15.095625 Dictyostelium purpureum 5786 Evosea other_Eukaryota 84.7 2.03e-17   NR XP_003292784.1 5786 g441793 i0 67.9 0.674698795180723 56 18 67.5 0 249 82 90 145 XP_003292784.1 uncharacterized protein DICPUDRAFT_41069 [Dictyostelium purpureum] diamond 168 84.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28341474 28341474 PRJNA550047_P_NODE_594386_length_199_cov_20.444444_g592413_i0 PRJNA550047 594386 199 20.444444 40.68444356 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.4 4.25e-11   NR XP_004338784.1 1257118 g592413 i0 46.2 0.979899497487437 65 35 98 0 5 199 670 734 XP_004338784.1 uncharacterized protein ACA1_382400 [Acanthamoeba castellanii str. Neff] diamond 195 67.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28671950 28671950 PRJNA550047_P_NODE_473727_length_239_cov_9.927711_g471754_i0 PRJNA550047 473727 239 9.927711 23.72722929 Acytosteliales 2058181 Evosea other_Eukaryota 44.7 0.00726   NR XP_004350713.1 261658 g471754 i0 41.5 0.928870292887029 41 24 51.5 0 1 123 405 445 XP_004350713.1 uncharacterized protein DFA_11766 [Cavenderia fasciculata] diamond 222 44.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
29036140 29036140 PRJNA550047_P_NODE_238148_length_300_cov_23.167401_g236179_i0 PRJNA550047 238148 300 23.167401 69.502203 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 70.1 1.77e-11   NR KAH3765764.1 1580589 g236179 i0 58.3 1.42 48 20 48 0 150 293 557 604 KAH3765764.1 transcriptional repressor [Pelomyxa schiedti] diamond 426 70.1 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29383288 29383288 PRJNA550047_P_NODE_144709_length_345_cov_5.058824_g142749_i0 PRJNA550047 144709 345 5.058824 17.4529428 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 72 6.83e-12   NR PRP78769.1 1890364 g142749 i0 39.1 2 115 47 80 1 10 285 227 341 PRP78769.1 glucan 1,3-beta-glucosidase [Planoprotostelium fungivorum] diamond 690 72 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29635458 29635458 PRJNA550047_P_NODE_187510_length_344_cov_13.778598_g185549_i0 PRJNA550047 187510 344 13.778598 47.39837712 Polysphondylium violaceum 133409 Evosea other_Eukaryota 49.3 5.76e-4   NR KAF2071955.1 133409 g185549 i0 56.1 0.357558139534884 41 18 35.8 0 2 124 389 429 KAF2071955.1 hypothetical protein CYY_006730 [Polysphondylium violaceum] diamond 123 49.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29667004 29667004 PRJNA550047_P_NODE_121790_length_345_cov_6.636029_g119830_i0 PRJNA550047 121790 345 6.636029 22.89430005 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.4 2.08e-4   NR XP_004349650.1 1257118 g119830 i0 55.8 0.373913043478261 43 18 37.4 1 132 4 208 249 XP_004349650.1 RhoGAP domain containing protein [Acanthamoeba castellanii str. Neff] diamond 129 50.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29857028 29857028 PRJNA550047_P_NODE_70831_length_345_cov_12.216912_g68871_i0 PRJNA550047 70831 345 12.216912 42.1483464 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.4 1.51e-15   NR XP_004352827.1 1257118 g68871 i0 42.4 1.14782608695652 132 58 99.1 2 3 344 427 558 XP_004352827.1 efflux ABC transporter, permease domain containing protein [Acanthamoeba castellanii str. Neff] diamond 396 82.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30219080 30219080 PRJNA550047_P_NODE_129572_length_345_cov_6.077206_g127612_i0 PRJNA550047 129572 345 6.077206 20.9663607 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.2 0.00697   NR XP_004184769.1 370355 g127612 i0 46.8 4.08695652173913 47 24 40.9 1 344 204 146 191 XP_004184769.1 FYVE, RhoGEF and PH domain containing protein, putative [Entamoeba invadens IP1] diamond 1410 46.6 0.991416309012876 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
30646568 30646568 PRJNA550047_P_NODE_428433_length_254_cov_10.038674_g426461_i0 PRJNA550047 428433 254 10.038674 25.49823196 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 111 2.53e-26   NR PRP89578.1 1890364 g426461 i0 67.9 0.956692913385827 81 26 95.7 0 12 254 1636 1716 PRP89578.1 ATP-binding protein [Planoprotostelium fungivorum] diamond 243 111 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30709868 30709868 PRJNA550047_P_NODE_311574_length_295_cov_20.234234_g309605_i0 PRJNA550047 311574 295 20.234234 59.6909903 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 57.4 5.12e-7   NR PRP73963.1 1890364 g309605 i0 47.9 0.488135593220339 48 25 48.8 0 2 145 589 636 PRP73963.1 WD40 repeat-containing protein [Planoprotostelium fungivorum] diamond 144 57.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30787888 30787888 PRJNA550047_P_NODE_227574_length_301_cov_7.368421_g225605_i0 PRJNA550047 227574 301 7.368421 22.17894721 Variosea 2605334 Evosea other_Eukaryota 79.3 1.06e-14   NR KAH3743669.1 1580589 g225605 i0 64.2 1.2358803986711 67 23 65.8 1 1 198 840 906 KAH3743669.1 protein mono-ADP-ribosyltransferase PARP6 [Pelomyxa schiedti] diamond 372 79.3 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30867827 30867827 PRJNA550047_P_NODE_240754_length_300_cov_16.383260_g238785_i0 PRJNA550047 240754 300 16.38326 49.14978 Cavenderia fasciculata 261658 Evosea other_Eukaryota 65.9 5.57e-10   NR XP_004358770.1 261658 g238785 i0 34.7 1.18 118 56 98 2 6 299 518 634 XP_004358770.1 DUF214 family protein [Cavenderia fasciculata] diamond 354 65.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
31215145 31215145 PRJNA550047_P_NODE_538255_length_217_cov_15.777778_g536282_i0 PRJNA550047 538255 217 15.777778 34.23777826 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 76.6 3.1e-14   NR PRP78792.1 1890364 g536282 i0 50.7 3.85714285714286 71 35 98.2 0 5 217 1798 1868 PRP78792.1 putative LRR receptor-like serine/threonine-protein kinase [Planoprotostelium fungivorum] diamond 837 76.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31483502 31483502 PRJNA550047_P_NODE_395356_length_267_cov_2.139175_g393384_i0 PRJNA550047 395356 267 2.139175 5.71159725 root 1 Root_unresolved Root_unresolved 53.9 5.78e-6   NR KAH3743385.1 1580589 g393384 i0 59.1 1.53932584269663 44 17 49.4 1 37 168 325 367 KAH3743385.1 glycoside hydrolase family protein [Pelomyxa schiedti] diamond 411 53.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31784680 31784680 PRJNA550047_P_NODE_361097_length_280_cov_12.555556_g359126_i0 PRJNA550047 361097 280 12.555556 35.1555568 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 92 2.71e-19   NR PRP88379.1 1890364 g359126 i0 48.8 1.89642857142857 86 44 92.1 0 12 269 21 106 PRP88379.1 WD repeat-containing protein 19-like [Planoprotostelium fungivorum] diamond 531 92 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32291488 32291488 PRJNA550047_P_NODE_346699_length_286_cov_10.694836_g344728_i0 PRJNA550047 346699 286 10.694836 30.58723096 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 45.8 0.00392   NR KYQ89680.1 361077 g344728 i0 34.8 0.692307692307692 66 42 69.2 1 69 266 3 67 KYQ89680.1 ankyrin repeat-containing protein [Tieghemostelium lacteum] diamond 198 45.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32559173 32559173 PRJNA550047_P_NODE_332259_length_291_cov_14.821101_g330289_i0 PRJNA550047 332259 291 14.821101 43.12940391 root 1 Root_unresolved Root_unresolved 43.1 0.0486   NR KAH3731779.1 1580589 g330289 i0 32.8 1.37113402061856 67 35 69.1 2 45 245 882 938 KAH3731779.1 4-alpha-glucanotransferase [Pelomyxa schiedti] diamond 399 43.1 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32576021 32576021 PRJNA550047_P_NODE_427859_length_254_cov_14.458564_g425887_i0 PRJNA550047 427859 254 14.458564 36.72475256 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 42.4 0.0426   NR PRP78675.1 1890364 g425887 i0 66.7 0.318897637795276 27 9 31.9 0 102 22 10 36 PRP78675.1 Endothelin-converting enzyme 2 [Planoprotostelium fungivorum] diamond 81 42.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32638413 32638413 PRJNA550047_P_NODE_256600_length_300_cov_6.449339_g254631_i0 PRJNA550047 256600 300 6.449339 19.348017 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 50.8 8.82e-5   NR XP_012748633.1 1410327 g254631 i0 57.1 0.49 49 19 47 1 48 188 234 282 XP_012748633.1 hypothetical protein SAMD00019534_114920 [Acytostelium subglobosum LB1] diamond 147 50.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
32873754 32873754 PRJNA550047_P_NODE_270560_length_299_cov_11.495575_g268591_i0 PRJNA550047 270560 299 11.495575 34.37176925 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 74.3 1e-13   NR KAF2074316.1 133409 g268591 i0 55.9 2.64882943143813 68 28 68.2 1 296 93 152 217 KAF2074316.1 hypothetical protein CYY_004376 [Polysphondylium violaceum] diamond 792 74.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32890575 32890575 PRJNA550047_P_NODE_50440_length_345_cov_21.944853_g48480_i0 PRJNA550047 50440 345 21.944853 75.70974285 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47 0.00366   NR XP_004339511.1 1257118 g48480 i0 66.7 0.234782608695652 27 9 23.5 0 299 219 10 36 XP_004339511.1 vacuolar fusion protein ccz1 family protein [Acanthamoeba castellanii str. Neff] diamond 81 47 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;