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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA546018" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA546018 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6889030 6889030 PRJNA546018_S_NODE_55666_length_205_cov_0.902778_g55341_i0 PRJNA546018 55666 205 0.902778 1.8506949 Lacunisphaera sp. 1961806 Bacteria Bacteria 96.7 1.02e-21   NR MDB6113615.1 1961806 g55341 i0 90 1.46341463414634 50 5 73.2 0 55 204 206 255 MDB6113615.1 putative FAD-linked oxidoreductase [Lacunisphaera sp.] diamond 300 96.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
11322391 11322391 PRJNA546018_S_NODE_49669_length_215_cov_2.110390_g49344_i0 PRJNA546018 49669 215 2.11039 4.5373385 Bacteria 2 Bacteria Bacteria 115 1.1599999999999999e-28   NR MBN8246459.1 2026799 g49344 i0 79.7 3.57209302325581 64 13 89.3 0 213 22 150 213 MBN8246459.1 efflux RND transporter permease subunit [Verrucomicrobiota bacterium] diamond 768 115 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
23463416 23463416 PRJNA546018_S_NODE_44739_length_229_cov_1.160714_g44414_i0 PRJNA546018 44739 229 1.160714 2.65803506 Lacunisphaera 1961799 Bacteria Bacteria 96.3 1.24e-21   NR HEY8993145.1 1961806 g44414 i0 81.1 1.40174672489083 53 10 69.4 0 14 172 103 155 HEY8993145.1 YCF48-related protein [Lacunisphaera sp.] diamond 321 96.7 0.995863495346432 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
27362676 27362676 PRJNA546018_S_NODE_53443_length_208_cov_1.163265_g53118_i0 PRJNA546018 53443 208 1.163265 2.4195912 Candidatus Udaeobacter sp. 2665650 Bacteria Bacteria 137 1.6199999999999998e-35   NR MFL6504060.1 2665650 g53118 i0 92.8 0.995192307692308 69 5 99.5 0 207 1 446 514 MFL6504060.1 FAD-binding and (Fe-S)-binding domain-containing protein [Candidatus Udaeobacter sp.] diamond 207 137 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Candidatus Udaeobacter Candidatus Udaeobacter sp.
27787850 27787850 PRJNA546018_S_NODE_28904_length_293_cov_2.125000_g28579_i0 PRJNA546018 28904 293 2.125 6.22625 Horticoccus 2986286 Bacteria Bacteria 101 2.1399999999999994e-23   NR PAW64921.1 1982319 g28579 i0 59.3 1.5358361774744 81 33 82.9 0 263 21 2 82 PAW64921.1 MAG: hypothetical protein B9S34_11765 [Opitutia bacterium Tous-C1TDCM] diamond 450 102 0.990196078431373 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium Tous-C1TDCM
27962313 27962313 PRJNA546018_S_NODE_37985_length_251_cov_1.026316_g37660_i0 PRJNA546018 37985 251 1.026316 2.57605316 Roseimicrobium sp. ORNL1 2711231 Bacteria Bacteria 138 2.09e-36   NR WP_165201968.1 2711231 g37660 i0 89.5 0.908366533864542 76 8 90.8 0 23 250 354 429 WP_165201968.1 preprotein translocase subunit SecY [Roseimicrobium sp. ORNL1] diamond 228 138 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Roseimicrobium Roseimicrobium sp. ORNL1
28040385 28040385 PRJNA546018_S_NODE_30225_length_286_cov_0.866667_g29900_i0 PRJNA546018 30225 286 0.866667 2.47866762 Opitutaceae 134623 Bacteria Bacteria 115 8.27e-29   NR HEY8995874.1 1961806 g29900 i0 66.3 1.93006993006993 92 30 96.5 1 11 286 136 226 HEY8995874.1 hypothetical protein [Lacunisphaera sp.] diamond 552 115 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
28404362 28404362 PRJNA546018_S_NODE_18966_length_373_cov_9.131410_g18641_i0 PRJNA546018 18966 373 9.13141 34.0601593 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 64.3 4.59e-9   NR MEN7973604.1 2026799 g18641 i0 53.6 0.450402144772118 56 25 44.2 1 347 183 733 788 MEN7973604.1 reverse transcriptase domain-containing protein [Verrucomicrobiota bacterium] diamond 168 64.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28657097 28657097 PRJNA546018_S_NODE_3407_length_1009_cov_3.419831_g3208_i0 PRJNA546018 3407 1009 3.419831 34.50609479 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 185 1.25e-48   NR MBI5387454.1 2026799 g3208 i0 53.3 1.02279484638256 167 77 49.7 1 48 548 1 166 MBI5387454.1 PAS domain S-box protein [Verrucomicrobiota bacterium] diamond 1032 185 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28877850 28877850 PRJNA546018_S_NODE_32668_length_273_cov_1.533019_g32343_i0 PRJNA546018 32668 273 1.533019 4.18514187 Opitutaceae bacterium 2006848 Bacteria Bacteria 133 2.21e-35   NR HEY0944486.1 2006848 g32343 i0 75.9 0.912087912087912 83 20 91.2 0 10 258 49 131 HEY0944486.1 transaldolase family protein [Opitutaceae bacterium] diamond 249 133 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
28941347 28941347 PRJNA546018_S_NODE_54148_length_207_cov_1.034247_g53823_i0 PRJNA546018 54148 207 1.034247 2.14089129 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 128 1.4399999999999999e-32   NR MBN8460050.1 2026799 g53823 i0 85.3 0.985507246376812 68 10 98.6 0 206 3 259 326 MBN8460050.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 204 128 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29193902 29193902 PRJNA546018_S_NODE_32789_length_272_cov_3.218009_g32464_i0 PRJNA546018 32789 272 3.218009 8.75298448 Brevifollis gellanilyticus 748831 Bacteria Bacteria 131 8.19e-34   NR WP_170266582.1 748831 g32464 i0 89.5 0.838235294117647 76 8 83.8 0 24 251 55 130 WP_170266582.1 S41 family peptidase [Brevifollis gellanilyticus] diamond 228 131 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Brevifollis Brevifollis gellanilyticus
29951566 29951566 PRJNA546018_S_NODE_57571_length_202_cov_0.921986_g57246_i0 PRJNA546018 57571 202 0.921986 1.86241172 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 77.4 2.26e-16   NR HON08814.1 2026799 g57246 i0 52.3 4.81188118811881 65 31 96.5 0 201 7 45 109 HON08814.1 glycosyl hydrolase [Verrucomicrobiota bacterium] diamond 972 77.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31784528 31784528 PRJNA546018_S_NODE_49757_length_215_cov_1.610390_g49432_i0 PRJNA546018 49757 215 1.61039 3.4623385 Opitutaceae bacterium 2006848 Bacteria Bacteria 94.4 1.77e-20   NR MDR1280815.1 2006848 g49432 i0 73.4 0.893023255813953 64 17 89.3 0 13 204 556 619 MDR1280815.1 hypothetical protein [Opitutaceae bacterium] diamond 192 94.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
32069372 32069372 PRJNA546018_S_NODE_23278_length_332_cov_1.833948_g22953_i0 PRJNA546018 23278 332 1.833948 6.08870736 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 59.7 4.26e-8   NR MBN8709212.1 2026799 g22953 i0 61.1 0.487951807228916 54 20 47.9 1 266 108 153 206 MBN8709212.1 TetR family transcriptional regulator [Verrucomicrobiota bacterium] diamond 162 59.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32196041 32196041 PRJNA546018_S_NODE_58458_length_198_cov_2.094891_g58133_i0 PRJNA546018 58458 198 2.094891 4.14788418 Opitutaceae bacterium 2006848 Bacteria Bacteria 94.7 9.93e-21   NR MBL9188591.1 2006848 g58133 i0 95.7 0.696969696969697 46 2 69.7 0 197 60 287 332 MBL9188591.1 TonB-dependent receptor [Opitutaceae bacterium] diamond 138 94.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
32638319 32638319 PRJNA546018_S_NODE_35320_length_261_cov_1.840000_g34995_i0 PRJNA546018 35320 261 1.84 4.8024 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.5 0.0247   NR MEN9359760.1 2026799 g34995 i0 33.8 0.816091954022989 71 47 81.6 0 258 46 282 352 MEN9359760.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 213 43.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32795794 32795794 PRJNA546018_S_NODE_41560_length_238_cov_4.926554_g41235_i0 PRJNA546018 41560 238 4.926554 11.72519852 Candidatus Synoicihabitans palmerolidicus 2818510 Bacteria Bacteria 113 4.160000000000001e-27   NR MCC5025902.1 2818510 g41235 i0 74 0.920168067226891 73 19 92 0 221 3 1762 1834 MCC5025902.1 polyketide synthase dehydratase domain-containing protein [Candidatus Synoicihabitans palmerolidicus] diamond 219 113 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Synoicihabitans Candidatus Synoicihabitans palmerolidicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;