contig_metadata
3 rows where analysis = "diamond", bioproject = "PRJNA546018" and tax_phylum = "Mollusca"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27299233 | 27299233 | PRJNA546018_S_NODE_24803_length_320_cov_3.054054_g24478_i0 | PRJNA546018 | 24803 | 320 | 3.054054 | 9.7729728 | Mytilus edulis | 6550 | Mollusca | Mollusca | 48.1 | 0.00109 | NR | CAG2204155.1 | 6550 | g24478 | i0 | 27 | 1.040625 | 111 | 71 | 94.7 | 2 | 320 | 18 | 121 | 231 | CAG2204155.1 unnamed protein product [Mytilus edulis] | diamond | 333 | 48.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Mytilida | Mytilidae | Mytilus | Mytilus edulis | |
| 27661565 | 27661565 | PRJNA546018_S_NODE_39704_length_244_cov_2.420765_g39379_i0 | PRJNA546018 | 39704 | 244 | 2.420765 | 5.9066666 | Mytilus | 6548 | Mollusca | Mollusca | 44.3 | 0.0104 | NR | CAG2218763.1 | 6550 | g39379 | i0 | 35.5 | 3.73770491803279 | 76 | 37 | 88.5 | 3 | 16 | 231 | 206 | 273 | CAG2218763.1 Tenascin-R,Angiopoietin-related protein 1,Ryncolin-1,Fibrinogen C domain-containing protein 1-A,Fibrinogen C domain-containing protein 1,Fibrinogen C domain-containing protein 1-B,Angiopoietin-2,Fibroleukin,Fibrinogen-like protein 1,Ficolin-2,Tenascin,Ficolin-1,Fibrinogen-like protein A,Microfibril-associated glycoprotein 4,Angiopoietin-related protein 7,Ryncolin-4 [Mytilus edulis] | diamond | 912 | 44.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Mytilida | Mytilidae | Mytilus | Mytilus edulis | |
| 30472022 | 30472022 | PRJNA546018_S_NODE_1853_length_1361_cov_9.640000_g1707_i0 | PRJNA546018 | 1853 | 1361 | 9.64 | 131.2004 | Opisthokonta | 33154 | Mollusca | Mollusca | 118 | 3.2200000000000004e-27 | NR | XP_053393133.1 | 6596 | g1707 | i0 | 37 | 5.76193975018369 | 184 | 82 | 38.8 | 4 | 629 | 1156 | 1 | 158 | XP_053393133.1 ras-related protein Rac1-like isoform X2 [Mercenaria mercenaria] | diamond | 7842 | 119 | 0.991596638655462 | Eukaryota | Opisthokonta | Metazoa | Mollusca | Bivalvia | Venerida | Veneridae | Mercenaria | Mercenaria mercenaria |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;