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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA546018" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA546018 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
510988 510988 PRJNA546018_S_NODE_36021_length_258_cov_2.791878_g35696_i0 PRJNA546018 36021 258 2.791878 7.20304524 Armatimonas 1042315 Bacteria Bacteria 135 2.83e-36   NR WP_184199988.1 685828 g35696 i0 78.8 3.72093023255814 80 17 93 0 1 240 116 195 WP_184199988.1 peptide chain release factor 2 [Armatimonas rosea] diamond 960 136 0.992647058823529 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
26888304 26888304 PRJNA546018_S_NODE_16341_length_408_cov_2.282421_g16016_i0 PRJNA546018 16341 408 2.282421 9.31227768 Armatimonadota bacterium 2033014 Bacteria Bacteria 43.5 0.0145   NR MEI8281863.1 2033014 g16016 i0 56.7 0.220588235294118 30 13 22.1 0 121 32 25 54 MEI8281863.1 hypothetical protein [Armatimonadota bacterium] diamond 90 43.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26888311 26888311 PRJNA546018_S_NODE_35161_length_262_cov_0.970149_g34836_i0 PRJNA546018 35161 262 0.970149 2.54179038 Fimbriimonas sp. 1936159 Bacteria Bacteria 62 1.69e-10   NR HEY0868140.1 1936159 g34836 i0 50.9 1.99236641221374 55 25 63 1 65 229 12 64 HEY0868140.1 DUF3072 domain-containing protein [Fimbriimonas sp.] diamond 522 62 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
27330900 27330900 PRJNA546018_S_NODE_38963_length_247_cov_1.661290_g38638_i0 PRJNA546018 38963 247 1.66129 4.1033863 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 52.8 8.16e-7   NR MEA2553357.1 2682144 g38638 i0 47.3 0.668016194331984 55 28 65.6 1 246 85 21 75 MEA2553357.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 165 52.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
28183093 28183093 PRJNA546018_S_NODE_47646_length_220_cov_2.572327_g47321_i0 PRJNA546018 47646 220 2.572327 5.6591194 Armatimonas sp. 1872638 Bacteria Bacteria 99.8 2.44e-22   NR WP_395090838.1 1872638 g47321 i0 63.9 3.91363636363636 72 26 98.2 0 1 216 619 690 WP_395090838.1 efflux RND transporter permease subunit [Armatimonas sp.] diamond 861 99.8 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
28720189 28720189 PRJNA546018_S_NODE_8987_length_583_cov_8.670498_g8671_i0 PRJNA546018 8987 583 8.670498 50.54900334 Armatimonas sp. 1872638 Bacteria Bacteria 187 5.39e-56   NR WP_395094797.1 1872638 g8671 i0 68.9 1.3893653516295 135 42 69.5 0 426 22 5 139 WP_395094797.1 sugar phosphate isomerase/epimerase family protein [Armatimonas sp.] diamond 810 187 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
30646399 30646399 PRJNA546018_S_NODE_34273_length_265_cov_3.196078_g33948_i0 PRJNA546018 34273 265 3.196078 8.4696067 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 90.5 3.23e-21   NR HEY3783338.1 2682144 g33948 i0 52.6 0.860377358490566 76 36 86 0 260 33 38 113 HEY3783338.1 VOC family protein [Fimbriimonadaceae bacterium] diamond 228 90.5 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30804609 30804609 PRJNA546018_S_NODE_29714_length_288_cov_4.515419_g29389_i0 PRJNA546018 29714 288 4.515419 13.00440672 Armatimonas rosea 685828 Bacteria Bacteria 111 1.06e-26   NR WP_184193818.1 685828 g29389 i0 61.2 0.885416666666667 85 33 88.5 0 267 13 67 151 WP_184193818.1 PmoA family protein [Armatimonas rosea] diamond 255 111 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
31341897 31341897 PRJNA546018_S_NODE_37876_length_251_cov_1.900000_g37551_i0 PRJNA546018 37876 251 1.9 4.769 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 53.5 6.26e-6   NR MEJ5295156.1 2682145 g37551 i0 92.6 0.322709163346614 27 2 32.3 0 77 157 315 341 MEJ5295156.1 serpin family protein [Fimbriimonadales bacterium] diamond 81 53.5 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
32449371 32449371 PRJNA546018_S_NODE_43499_length_232_cov_3.192982_g43174_i0 PRJNA546018 43499 232 3.192982 7.40771824 Chthonomonas sp. 2282153 Bacteria Bacteria 87.8 7.73e-19   NR MBL8059447.1 2282153 g43174 i0 98 0.646551724137931 50 1 64.7 0 62 211 132 181 MBL8059447.1 phosphate ABC transporter permease subunit PstC [Chthonomonas sp.] diamond 150 87.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas sp.
32575850 32575850 PRJNA546018_S_NODE_59779_length_193_cov_2.462121_g59454_i0 PRJNA546018 59779 193 2.462121 4.75189353 Armatimonadota bacterium 2033014 Bacteria Bacteria 110 8.090000000000001e-27   NR MFN3648157.1 2033014 g59454 i0 82.5 0.979274611398964 63 11 97.9 0 191 3 243 305 MFN3648157.1 NAD(P)/FAD-dependent oxidoreductase [Armatimonadota bacterium] diamond 189 110 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32701469 32701469 PRJNA546018_S_NODE_45540_length_226_cov_2.757576_g45215_i0 PRJNA546018 45540 226 2.757576 6.23212176 Armatimonadota bacterium 2033014 Bacteria Bacteria 80.9 4.19e-18   NR GIV22148.1 2033014 g45215 i0 72.4 1.60619469026549 58 16 77 0 181 8 11 68 GIV22148.1 MAG: hypothetical protein KatS3mg023_3899 [Armatimonadota bacterium] diamond 363 80.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32764501 32764501 PRJNA546018_S_NODE_24520_length_322_cov_5.386973_g24195_i0 PRJNA546018 24520 322 5.386973 17.34605306 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 62.8 8.15e-9   NR GIV12262.1 2682145 g24195 i0 51.3 0.708074534161491 76 14 62.4 2 21 221 415 476 GIV12262.1 MAG: aminotransferase [Fimbriimonadales bacterium] diamond 228 62.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
32873736 32873736 PRJNA546018_S_NODE_47120_length_222_cov_1.211180_g46795_i0 PRJNA546018 47120 222 1.21118 2.6888196 Armatimonas 1042315 Bacteria Bacteria 103 1.0799999999999999e-24   NR WP_184192971.1 685828 g46795 i0 69.7 1.78378378378378 66 20 89.2 0 221 24 156 221 WP_184192971.1 DUF1559 domain-containing protein [Armatimonas rosea] diamond 396 103 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;