RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA546018" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA546018 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30520229 30520229 PRJNA546018_S_NODE_3413_length_1008_cov_9.888068_g3214_i0 PRJNA546018 3413 1008 9.888068 99.67172544 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 116 2.57e-27   NR KAJ5072066.1 1746090 g3214 i0 40.1 0.4375 147 83 42.6 3 490 62 50 195 KAJ5072066.1 hypothetical protein M0811_09710 [Anaeramoeba ignava] diamond 441 116 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
30867718 30867718 PRJNA546018_S_NODE_3174_length_1048_cov_6.956434_g2982_i0 PRJNA546018 3174 1048 6.956434 72.90342832 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 122 3.099999999999999e-29   NR KAJ5072066.1 1746090 g2982 i0 41.7 0.466603053435114 163 88 46.4 5 533 1018 39 195 KAJ5072066.1 hypothetical protein M0811_09710 [Anaeramoeba ignava] diamond 489 122 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;