RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA543299" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA543299 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27235910 27235910 PRJNA543299_P_NODE_27223_length_151_cov_2.500000_g27066_i0 PRJNA543299 27223 151 2.5 3.775 Anthophora plagiata 597819 Arthropoda Arthropoda 43.1 0.00784   NR CAK9813121.1 597819 g27066 i0 48.6 2.04635761589404 35 18 69.5 0 105 1 222 256 CAK9813121.1 Transposable element Tc1 transposase [Anthophora plagiata] diamond 309 43.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Apidae Anthophora Anthophora plagiata
27804609 27804609 PRJNA543299_P_NODE_20804_length_167_cov_0.864407_g20647_i0 PRJNA543299 20804 167 0.864407 1.44355969 Ixodes hexagonus 34612 Arthropoda Arthropoda 48.1 1.62e-4   NR CAL6198435.1 34612 g20647 i0 65.6 0.574850299401198 32 11 57.5 0 161 66 182 213 CAL6198435.1 unnamed protein product [Ixodes hexagonus] diamond 96 48.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Ixodida Ixodidae Ixodes Ixodes hexagonus
30914386 30914386 PRJNA543299_P_NODE_23954_length_163_cov_0.894737_g23797_i0 PRJNA543299 23954 163 0.894737 1.45842131 Insecta 50557 Arthropoda Arthropoda 47 3.92e-4   NR XP_062714690.1 7160 g23797 i0 100 8.04294478527607 23 0 42.3 0 71 3 735 757 XP_062714690.1 alpha-actinin, sarcomeric isoform X2 [Aedes albopictus] diamond 1311 47 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Aedes Aedes albopictus
32779206 32779206 PRJNA543299_P_NODE_24340_length_163_cov_0.894737_g24183_i0 PRJNA543299 24340 163 0.894737 1.45842131 Daphnia 6668 Arthropoda Arthropoda 50.4 1.19e-5   NR KZS20822.1 35525 g24183 i0 76.7 1.65644171779141 30 7 55.2 0 163 74 143 172 KZS20822.1 Uncharacterized protein APZ42_012487 [Daphnia magna] diamond 270 50.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia magna

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;