RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA541476" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA541476 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27566548 27566548 PRJNA541476_P_NODE_15484_length_306_cov_1.523605_g15278_i0 PRJNA541476 15484 306 1.523605 4.6622313 Bacteria 2 Bacteria Bacteria 52.8 2.14e-5   NR MBL7046902.1 2026760 g15278 i0 37.3 2.99019607843137 59 36 57.8 1 182 6 39 96 MBL7046902.1 alpha/beta hydrolase [Fidelibacterota bacterium] diamond 915 52.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29603772 29603772 PRJNA541476_P_NODE_30090_length_251_cov_0.870787_g29884_i0 PRJNA541476 30090 251 0.870787 2.18567537 Fidelibacterota bacterium 2026760 Bacteria Bacteria 77.4 2.31e-14   NR MEC9448390.1 2026760 g29884 i0 51.9 2.74900398406374 81 37 95.6 2 248 9 47 126 MEC9448390.1 FAD-dependent monooxygenase [Fidelibacterota bacterium] diamond 690 77.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;