contig_metadata
27 rows where analysis = "diamond", bioproject = "PRJNA541476" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 509179 | 509179 | PRJNA541476_P_NODE_38081_length_243_cov_1.988235_g37875_i0 | PRJNA541476 | 38081 | 243 | 1.988235 | 4.83141105 | Bacteria | 2 | Bacteria | Bacteria | 63.5 | 1.74e-9 | NR | MBR2676149.1 | 2060878 | g37875 | i0 | 55.7 | 4.2962962962963 | 61 | 20 | 75.3 | 1 | 225 | 43 | 387 | 440 | MBR2676149.1 response regulator [Solobacterium sp.] | diamond | 1044 | 63.9 | 0.993740219092332 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Solobacterium | Solobacterium sp. | ||
| 16421361 | 16421361 | PRJNA541476_P_NODE_9593_length_367_cov_5.085034_g9387_i0 | PRJNA541476 | 9593 | 367 | 5.085034 | 18.66207478 | Metabacillus sp. | 2675275 | Bacteria | Bacteria | 122 | 8.16e-34 | NR | HZH60916.1 | 2675275 | g9387 | i0 | 78.3 | 0.678474114441417 | 83 | 18 | 67.8 | 0 | 118 | 366 | 1 | 83 | HZH60916.1 ATP synthase subunit C family protein [Metabacillus sp.] | diamond | 249 | 122 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Metabacillus | Metabacillus sp. | ||
| 26602846 | 26602846 | PRJNA541476_P_NODE_4361_length_548_cov_4.985263_g4165_i0 | PRJNA541476 | 4361 | 548 | 4.985263 | 27.31924124 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 48.1 | 0.00179 | NR | MDY0118353.1 | 1903720 | g4165 | i0 | 31.5 | 0.39963503649635 | 73 | 48 | 39.4 | 2 | 449 | 234 | 41 | 112 | MDY0118353.1 hypothetical protein [Bacilli bacterium] | diamond | 219 | 48.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 26697914 | 26697914 | PRJNA541476_P_NODE_41101_length_235_cov_2.549383_g40895_i0 | PRJNA541476 | 41101 | 235 | 2.549383 | 5.99105005 | Acidaminococcaceae bacterium | 2049052 | Bacteria | Bacteria | 42.7 | 0.0322 | NR | MBQ9284252.1 | 2049052 | g40895 | i0 | 37.5 | 1.22553191489362 | 48 | 29 | 60 | 1 | 201 | 61 | 48 | 95 | MBQ9284252.1 IS30 family transposase [Acidaminococcaceae bacterium] | diamond | 288 | 42.7 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Acidaminococcales | Acidaminococcaceae | Acidaminococcaceae bacterium | |||
| 26761261 | 26761261 | PRJNA541476_P_NODE_29161_length_252_cov_0.865922_g28955_i0 | PRJNA541476 | 29161 | 252 | 0.865922 | 2.18212344 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 72 | 6.8e-13 | NR | RKW58770.1 | 1898203 | g28955 | i0 | 97.2 | 0.428571428571429 | 36 | 1 | 42.9 | 0 | 109 | 2 | 1 | 36 | RKW58770.1 MAG: M48 family peptidase [Lachnospiraceae bacterium] | diamond | 108 | 72 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 27172490 | 27172490 | PRJNA541476_P_NODE_27722_length_254_cov_1.508287_g27516_i0 | PRJNA541476 | 27722 | 254 | 1.508287 | 3.83104898 | Planococcus | 1372 | Bacteria | Bacteria | 54.3 | 3.45e-6 | NR | WP_082707498.1 | 1372 | g27516 | i0 | 44.8 | 3.36614173228346 | 58 | 32 | 68.5 | 0 | 61 | 234 | 163 | 220 | WP_082707498.1 MULTISPECIES: PLP-dependent aminotransferase family protein [Planococcus] | diamond | 855 | 54.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Planococcus | |||
| 27804591 | 27804591 | PRJNA541476_P_NODE_41644_length_229_cov_3.153846_g41438_i0 | PRJNA541476 | 41644 | 229 | 3.153846 | 7.22230734 | Peptostreptococcaceae bacterium AGR-M142 | 3133363 | Bacteria | Bacteria | 44.7 | 0.00679 | NR | WXR62754.1 | 3133363 | g41438 | i0 | 38.6 | 1.65065502183406 | 70 | 43 | 91.7 | 0 | 7 | 216 | 499 | 568 | WXR62754.1 cadherin-like beta sandwich domain-containing protein [Peptostreptococcaceae bacterium AGR-M142] | diamond | 378 | 44.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Peptostreptococcaceae bacterium AGR-M142 | |||
| 27930711 | 27930711 | PRJNA541476_P_NODE_21505_length_276_cov_1.177340_g21299_i0 | PRJNA541476 | 21505 | 276 | 1.17734 | 3.2494584 | Virgibacillus phasianinus | 2017483 | Bacteria | Bacteria | 50.1 | 1.26e-4 | NR | WP_089061277.1 | 2017483 | g21299 | i0 | 33.8 | 0.706521739130435 | 65 | 40 | 70.7 | 1 | 80 | 274 | 144 | 205 | WP_089061277.1 GNAT family N-acetyltransferase [Virgibacillus phasianinus] | diamond | 195 | 50.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Virgibacillus | Virgibacillus phasianinus | ||
| 28071769 | 28071769 | PRJNA541476_P_NODE_24385_length_265_cov_1.510417_g24179_i0 | PRJNA541476 | 24385 | 265 | 1.510417 | 4.00260505 | Clostridia | 186801 | Bacteria | Bacteria | 70.5 | 6.21e-12 | NR | WP_103083235.1 | 84032 | g24179 | i0 | 45.6 | 3.79245283018868 | 68 | 35 | 74.7 | 1 | 1 | 198 | 164 | 231 | WP_103083235.1 glycoside hydrolase family 5 protein [Clostridium thermosuccinogenes] | diamond | 1005 | 71.2 | 0.990168539325843 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium thermosuccinogenes | ||
| 28372660 | 28372660 | PRJNA541476_P_NODE_2906_length_687_cov_3.890879_g2715_i0 | PRJNA541476 | 2906 | 687 | 3.890879 | 26.73033873 | Paenibacillus agilis | 3020863 | Bacteria | Bacteria | 77.4 | 2.77e-12 | NR | WP_186786209.1 | 3020863 | g2715 | i0 | 40.7 | 1.21834061135371 | 140 | 69 | 61.1 | 4 | 266 | 685 | 871 | 996 | WP_186786209.1 cadherin-like beta sandwich domain-containing protein [Paenibacillus agilis] | diamond | 837 | 77.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus agilis | ||
| 28435988 | 28435988 | PRJNA541476_P_NODE_40546_length_241_cov_2.654762_g40340_i0 | PRJNA541476 | 40546 | 241 | 2.654762 | 6.39797642 | Halanaerobium sp. DL- | 1895664 | Bacteria | Bacteria | 77.4 | 1.87e-14 | NR | WP_114474350.1 | 1653064 | g40340 | i0 | 58.3 | 5.01659751037344 | 60 | 25 | 74.7 | 0 | 61 | 240 | 39 | 98 | WP_114474350.1 peptide-methionine (R)-S-oxide reductase MsrB [Halanaerobium sp. DL-01] | diamond | 1209 | 77.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Halanaerobiales | Halanaerobiaceae | Halanaerobium | Halanaerobium sp. DL-01 | ||
| 28450915 | 28450915 | PRJNA541476_P_NODE_11706_length_339_cov_1.763158_g11500_i0 | PRJNA541476 | 11706 | 339 | 1.763158 | 5.97710562 | Haloimpatiens | 1755832 | Bacteria | Bacteria | 76.3 | 2.06e-13 | NR | WP_138205802.1 | 1380675 | g11500 | i0 | 39.8 | 5.09734513274336 | 93 | 56 | 82.3 | 0 | 294 | 16 | 561 | 653 | WP_138205802.1 DsrE/DsrF/DrsH-like family protein [Haloimpatiens lingqiaonensis] | diamond | 1728 | 76.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Haloimpatiens | Haloimpatiens lingqiaonensis | ||
| 28671901 | 28671901 | PRJNA541476_P_NODE_28887_length_252_cov_0.871508_g28681_i0 | PRJNA541476 | 28887 | 252 | 0.871508 | 2.19620016 | Halanaerobium | 2330 | Bacteria | Bacteria | 105 | 2.51e-24 | NR | WP_005486959.1 | 43595 | g28681 | i0 | 78.1 | 3.80952380952381 | 64 | 14 | 76.2 | 0 | 193 | 2 | 184 | 247 | WP_005486959.1 Tex family protein [Halanaerobium saccharolyticum] | diamond | 960 | 106 | 0.990566037735849 | Bacteria | Bacillati | Bacillota | Clostridia | Halanaerobiales | Halanaerobiaceae | Halanaerobium | Halanaerobium saccharolyticum | ||
| 29871680 | 29871680 | PRJNA541476_P_NODE_29311_length_251_cov_2.235955_g29105_i0 | PRJNA541476 | 29311 | 251 | 2.235955 | 5.61224705 | Bacillota | 1239 | Bacteria | Bacteria | 79.3 | 4.98e-15 | NR | MDO5018305.1 | 1689303 | g29105 | i0 | 68.6 | 9.2390438247012 | 51 | 16 | 61 | 0 | 1 | 153 | 410 | 460 | MDO5018305.1 glycine--tRNA ligase [Lagierella massiliensis] | diamond | 2319 | 80.1 | 0.990012484394507 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Lagierella | Lagierella massiliensis | ||
| 29983111 | 29983111 | PRJNA541476_P_NODE_34271_length_247_cov_0.885057_g34065_i0 | PRJNA541476 | 34271 | 247 | 0.885057 | 2.18609079 | Halocella sp. SP3-1 | 2382161 | Bacteria | Bacteria | 78.6 | 5.5e-15 | NR | WP_125990340.1 | 2382161 | g34065 | i0 | 45.9 | 0.898785425101215 | 74 | 40 | 89.9 | 0 | 2 | 223 | 263 | 336 | WP_125990340.1 hypothetical protein [Halocella sp. SP3-1] | diamond | 222 | 78.6 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Halanaerobiales | Halanaerobiaceae | Halocella | Halocella sp. SP3-1 | ||
| 30425876 | 30425876 | PRJNA541476_P_NODE_7533_length_413_cov_0.941176_g7329_i0 | PRJNA541476 | 7533 | 413 | 0.941176 | 3.88705688 | Mammaliicoccus sciuri | 1296 | Bacteria | Bacteria | 129 | 5.11e-36 | NR | MCH5142011.1 | 1296 | g7329 | i0 | 70.4 | 0.588377723970944 | 81 | 24 | 58.8 | 0 | 410 | 168 | 2 | 82 | MCH5142011.1 hypothetical protein [Mammaliicoccus sciuri] | diamond | 243 | 129 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Mammaliicoccus | Mammaliicoccus sciuri | ||
| 30709696 | 30709696 | PRJNA541476_P_NODE_27354_length_255_cov_1.653846_g27148_i0 | PRJNA541476 | 27354 | 255 | 1.653846 | 4.2173073 | Eubacterium ramulus | 39490 | Bacteria | Bacteria | 41.6 | 0.0238 | NR | WP_336302767.1 | 39490 | g27148 | i0 | 41.9 | 0.505882352941176 | 43 | 25 | 50.6 | 0 | 242 | 114 | 4 | 46 | WP_336302767.1 hypothetical protein [Eubacterium ramulus] | diamond | 129 | 41.6 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Eubacteriaceae | Eubacterium | Eubacterium ramulus | ||
| 30773115 | 30773115 | PRJNA541476_P_NODE_20234_length_281_cov_1.437500_g20028_i0 | PRJNA541476 | 20234 | 281 | 1.4375 | 4.039375 | Neobacillus niacini | 86668 | Bacteria | Bacteria | 61.6 | 1.28e-8 | NR | WP_335435396.1 | 86668 | g20028 | i0 | 42.9 | 1.81494661921708 | 91 | 51 | 97.2 | 1 | 273 | 1 | 222 | 311 | WP_335435396.1 flagellin [Neobacillus niacini] | diamond | 510 | 61.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Neobacillus | Neobacillus niacini | ||
| 31057699 | 31057699 | PRJNA541476_P_NODE_37435_length_244_cov_0.912281_g37229_i0 | PRJNA541476 | 37435 | 244 | 0.912281 | 2.22596564 | Enterococcus faecalis | 1351 | Bacteria | Bacteria | 152 | 1.0499999999999999e-40 | NR | WP_263698349.1 | 1351 | g37229 | i0 | 95.1 | 0.995901639344262 | 81 | 4 | 99.6 | 0 | 244 | 2 | 251 | 331 | WP_263698349.1 type 2 lanthipeptide synthetase LanM [Enterococcus faecalis] | diamond | 243 | 152 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 31198165 | 31198165 | PRJNA541476_P_NODE_13235_length_324_cov_1.235060_g13029_i0 | PRJNA541476 | 13235 | 324 | 1.23506 | 4.0015944 | Bacillati | 1783272 | Bacteria | Bacteria | 97.8 | 5.36e-22 | NR | NPV28270.1 | 1879010 | g13029 | i0 | 49.1 | 7.66666666666667 | 106 | 48 | 98.1 | 2 | 5 | 322 | 82 | 181 | NPV28270.1 4-hydroxy-tetrahydrodipicolinate synthase [Bacillota bacterium] | diamond | 2484 | 98.2 | 0.995926680244399 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 31293388 | 31293388 | PRJNA541476_P_NODE_25455_length_261_cov_1.867021_g25249_i0 | PRJNA541476 | 25455 | 261 | 1.867021 | 4.87292481 | root | 1 | Root_unresolved | Root_unresolved | 43.9 | 0.00206 | NR | WP_416083710.1 | 1352 | g25249 | i0 | 38.6 | 1.26436781609195 | 70 | 24 | 58.6 | 1 | 215 | 63 | 1 | 70 | WP_416083710.1 hypothetical protein, partial [Enterococcus faecium] | diamond | 330 | 44.3 | 0.99097065462754 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecium | ||
| 31373603 | 31373603 | PRJNA541476_P_NODE_18296_length_290_cov_1.423963_g18090_i0 | PRJNA541476 | 18296 | 290 | 1.423963 | 4.1294927 | Candidatus Merdisoma sp. JLR.KK | 3101169 | Bacteria | Bacteria | 43.9 | 0.0253 | NR | WP_334337558.1 | 3114299 | g18090 | i0 | 40.4 | 0.537931034482759 | 52 | 31 | 53.8 | 0 | 275 | 120 | 361 | 412 | WP_334337558.1 hypothetical protein [Candidatus Merdisoma sp. JLR.KK011] | diamond | 156 | 43.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Candidatus Merdisoma | Candidatus Merdisoma sp. JLR.KK011 | ||
| 31405262 | 31405262 | PRJNA541476_P_NODE_5956_length_464_cov_1.534527_g5753_i0 | PRJNA541476 | 5956 | 464 | 1.534527 | 7.12020528 | Paenibacillus sp. MMO-177 | 3081289 | Bacteria | Bacteria | 113 | 6.57e-26 | NR | WP_336788583.1 | 3081289 | g5753 | i0 | 41.8 | 1.88793103448276 | 146 | 78 | 93.8 | 3 | 436 | 2 | 117 | 256 | WP_336788583.1 GMC family oxidoreductase [Paenibacillus sp. MMO-177] | diamond | 876 | 113 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. MMO-177 | ||
| 31641263 | 31641263 | PRJNA541476_P_NODE_28796_length_252_cov_0.871508_g28590_i0 | PRJNA541476 | 28796 | 252 | 0.871508 | 2.19620016 | Bacillota | 1239 | Bacteria | Bacteria | 79 | 7.71e-15 | NR | WP_218653432.1 | 82348 | g28590 | i0 | 52.6 | 6.80952380952381 | 78 | 34 | 92.9 | 1 | 249 | 16 | 161 | 235 | WP_218653432.1 cation-translocating P-type ATPase [Streptococcus pluranimalium] | diamond | 1716 | 79.7 | 0.991217063989962 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus pluranimalium | ||
| 31879354 | 31879354 | PRJNA541476_P_NODE_22737_length_271_cov_1.363636_g22531_i0 | PRJNA541476 | 22737 | 271 | 1.363636 | 3.69545356 | Bacillota bacterium | 1879010 | Bacteria | Bacteria | 44.3 | 0.0148 | NR | MBQ7016389.1 | 1879010 | g22531 | i0 | 33.7 | 0.918819188191882 | 83 | 51 | 91.9 | 2 | 264 | 16 | 298 | 376 | MBQ7016389.1 DUF3472 domain-containing protein [Bacillota bacterium] | diamond | 249 | 44.3 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 31926010 | 31926010 | PRJNA541476_P_NODE_10917_length_348_cov_2.010909_g10711_i0 | PRJNA541476 | 10917 | 348 | 2.010909 | 6.99796332 | Bacteria | 2 | Bacteria | Bacteria | 131 | 2.29e-34 | NR | HLU11181.1 | 1871622 | g10711 | i0 | 50.9 | 7.94827586206897 | 116 | 55 | 100 | 2 | 348 | 1 | 11 | 124 | HLU11181.1 hypothetical protein [Oceanobacillus sp.] | diamond | 2766 | 131 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Oceanobacillus | Oceanobacillus sp. | ||
| 32210901 | 32210901 | PRJNA541476_P_NODE_618_length_1418_cov_3.846840_g526_i0 | PRJNA541476 | 618 | 1418 | 3.84684 | 54.5481912 | PVC group | 1783257 | Bacteria | Bacteria | 72 | 4.15e-9 | NR | WP_218229321.1 | 79263 | g526 | i0 | 28.3 | 2.86459802538787 | 350 | 195 | 72.4 | 15 | 1401 | 376 | 406 | 706 | WP_218229321.1 cadherin-like beta sandwich domain-containing protein [Paenibacillus chitinolyticus] | diamond | 4062 | 72 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus chitinolyticus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;