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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA541476" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA541476 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3059457 3059457 PRJNA541476_P_NODE_20083_length_282_cov_0.861244_g19877_i0 PRJNA541476 20083 282 0.861244 2.42870808 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 139 5.93e-36   NR XP_067918035.1 483139 g19877 i0 67 14 94 31 100 0 282 1 6 99 XP_067918035.1 p-loop containing nucleoside triphosphate hydrolase protein [Cystoisospora suis] diamond 3948 139 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
13263144 13263144 PRJNA541476_P_NODE_9811_length_364_cov_1.549828_g9605_i0 PRJNA541476 9811 364 1.549828 5.64137392 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 139 1.68e-36   NR XP_029217377.1 94643 g9605 i0 55.8 0.989010989010989 120 53 98.9 0 362 3 189 308 XP_029217377.1 putative adenylosuccinate synthetase [Besnoitia besnoiti] diamond 360 139 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
24735144 24735144 PRJNA541476_P_NODE_40880_length_237_cov_4.908537_g40674_i0 PRJNA541476 40880 237 4.908537 11.63323269 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 112 5.14e-27   NR XP_003881363.1 572307 g40674 i0 65.8 1.9620253164557 76 26 96.2 0 6 233 360 435 XP_003881363.1 hypothetical protein NCLIV_043950 [Neospora caninum Liverpool] diamond 465 112 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
27377509 27377509 PRJNA541476_P_NODE_37143_length_244_cov_0.982456_g36937_i0 PRJNA541476 37143 244 0.982456 2.39719264 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00317   NR XP_029219765.1 94643 g36937 i0 52.4 0.885245901639344 42 20 51.6 0 237 112 769 810 XP_029219765.1 hypothetical protein BESB_054070 [Besnoitia besnoiti] diamond 216 45.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
27535150 27535150 PRJNA541476_P_NODE_23583_length_268_cov_1.333333_g23377_i0 PRJNA541476 23583 268 1.333333 3.57333244 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 131 4.02e-33   NR SOV79628.1 5854 g23377 i0 69.7 41.8432835820896 89 27 99.6 0 268 2 1158 1246 SOV79628.1 U5 small nuclear ribonuclear protein, putative [Plasmodium reichenowi] diamond 11214 131 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
27583285 27583285 PRJNA541476_P_NODE_16304_length_301_cov_1.368421_g16098_i0 PRJNA541476 16304 301 1.368421 4.11894721 Toxoplasma gondii GT1 507601 SAR_Eukaryotes SAR_Eukaryotes 94.4 9e-21   NR EPR61882.1 507601 g16098 i0 41.6 2.86046511627907 101 53 98.7 3 299 3 167 263 EPR61882.1 hypothetical protein TGGT1_234507 [Toxoplasma gondii GT1] diamond 861 94.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
27741599 27741599 PRJNA541476_P_NODE_6524_length_442_cov_5.192412_g6320_i0 PRJNA541476 6524 442 5.192412 22.95046104 Cryptosporidium xiaoi 659607 SAR_Eukaryotes SAR_Eukaryotes 77.8 7.58e-15   NR KAK6588730.1 659607 g6320 i0 50 0.678733031674208 100 46 67.9 1 441 142 64 159 KAK6588730.1 hypothetical protein RS030_333721, partial [Cryptosporidium xiaoi] diamond 300 77.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium xiaoi
28657032 28657032 PRJNA541476_P_NODE_12267_length_333_cov_1.750000_g12061_i0 PRJNA541476 12267 333 1.75 5.8275 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 67 2.98e-10   NR XP_029215085.1 94643 g12061 i0 49.3 1.27027027027027 73 30 59.5 2 17 214 367 439 XP_029215085.1 aspartyl protease [Besnoitia besnoiti] diamond 423 67 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
29492692 29492692 PRJNA541476_P_NODE_26890_length_256_cov_2.612022_g26684_i0 PRJNA541476 26890 256 2.612022 6.68677632 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 9.54e-26   NR XP_013229976.1 5802 g26684 i0 63.2 9.69140625 76 28 89.1 0 228 1 7 82 XP_013229976.1 60S ribosomal protein L31, putative [Eimeria tenella] diamond 2481 103 0.990291262135922 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
30140659 30140659 PRJNA541476_P_NODE_41992_length_223_cov_4.086667_g41786_i0 PRJNA541476 41992 223 4.086667 9.11326741 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 70.9 3.36e-12   NR CAL7864463.1 1344799 g41786 i0 43.2 0.995515695067265 74 41 98.2 1 3 221 324 397 CAL7864463.1 unnamed protein product [Sarcocystis calchasi] diamond 222 70.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31278470 31278470 PRJNA541476_P_NODE_6175_length_455_cov_4.609948_g5972_i0 PRJNA541476 6175 455 4.609948 20.9752634 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 104 6.489999999999999e-23   NR XP_026190971.1 88456 g5972 i0 47.4 1.27912087912088 97 48 63.3 2 6 293 334 428 XP_026190971.1 phytepsin-like [Cyclospora cayetanensis] diamond 582 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
32227785 32227785 PRJNA541476_P_NODE_9338_length_372_cov_1.725753_g9132_i0 PRJNA541476 9338 372 1.725753 6.41980116 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 79.7 4.89e-15   NR VWU51121.1 2600580 g9132 i0 41 0.806451612903226 100 49 73.4 3 273 1 136 234 VWU51121.1 conserved protein, unknown function [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 300 79.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles
32291283 32291283 PRJNA541476_P_NODE_10819_length_350_cov_0.953069_g10613_i0 PRJNA541476 10819 350 0.953069 3.3357415 Cryptosporidium muris RN66 441375 SAR_Eukaryotes SAR_Eukaryotes 121 6.97e-30   NR XP_002141413.1 441375 g10613 i0 51 4.25142857142857 100 48 84.9 1 344 48 49 148 XP_002141413.1 eukaryotic translation initiation factor 5, putative [Cryptosporidium muris RN66] diamond 1488 121 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
32827536 32827536 PRJNA541476_P_NODE_5240_length_497_cov_1.087264_g5038_i0 PRJNA541476 5240 497 1.087264 5.40370208 Toxoplasma gondii ME49 508771 SAR_Eukaryotes SAR_Eukaryotes 130 1.42e-33   NR XP_018637379.1 508771 g5038 i0 41.3 2.96981891348089 160 68 96.6 1 490 11 114 247 XP_018637379.1 zinc carboxypeptidase superfamily protein [Toxoplasma gondii ME49] diamond 1476 130 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;