RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA541476" and tax_phylum = "Acidobacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 26 ✖

tax_kingdom 1

bioproject 1

  • PRJNA541476 · 26 ✖

analysis 1

  • diamond · 26 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8161575 8161575 PRJNA541476_P_NODE_27887_length_253_cov_2.666667_g27681_i0 PRJNA541476 27887 253 2.666667 6.74666751 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 117 6.79e-29   NR HMT09336.1 2283092 g27681 i0 82.6 23.6205533596838 69 9 78.3 1 253 56 77 145 HMT09336.1 acyl-CoA carboxylase subunit beta [Pyrinomonadaceae bacterium] diamond 5976 117 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
23460846 23460846 PRJNA541476_P_NODE_2259_length_785_cov_2.712079_g2081_i0 PRJNA541476 2259 785 2.712079 21.28982015 Acidobacteriota bacterium 1978231 Bacteria Bacteria 364 4.05e-123   NR MEM7585604.1 1978231 g2081 i0 66.7 3.98980891719745 261 87 99.7 0 2 784 4 264 MEM7585604.1 NAD-dependent epimerase/dehydratase family protein [Acidobacteriota bacterium] diamond 3132 364 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
24735223 24735223 PRJNA541476_P_NODE_7720_length_407_cov_1.790419_g7516_i0 PRJNA541476 7720 407 1.790419 7.28700533 Pseudomonadati 3379134 Bacteria Bacteria 125 3.65e-30   NR MCS6817120.1 2052146 g7516 i0 63.2 9.93611793611794 106 30 78.1 1 1 318 1354 1450 MCS6817120.1 glutamate synthase large subunit [Blastocatellia bacterium] diamond 4044 125 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
27046307 27046307 PRJNA541476_P_NODE_25142_length_262_cov_2.328042_g24936_i0 PRJNA541476 25142 262 2.328042 6.09947004 Terracidiphilus sp. 1964191 Bacteria Bacteria 47.8 7.93e-4   NR HEV2323067.1 1964191 g24936 i0 36.5 2.45038167938931 74 46 84.7 1 242 21 116 188 HEV2323067.1 hypothetical protein [Terracidiphilus sp.] diamond 642 47.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
27077881 27077881 PRJNA541476_P_NODE_25462_length_261_cov_1.787234_g25256_i0 PRJNA541476 25462 261 1.787234 4.66468074 Blastocatellia bacterium 2052146 Bacteria Bacteria 108 3.43e-25   NR MFP5263770.1 2052146 g25256 i0 62.1 1 87 33 100 0 1 261 862 948 MFP5263770.1 HYR domain-containing protein [Blastocatellia bacterium] diamond 261 108 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
27299186 27299186 PRJNA541476_P_NODE_20803_length_279_cov_1.160194_g20597_i0 PRJNA541476 20803 279 1.160194 3.23694126 Acidobacteriota bacterium 1978231 Bacteria Bacteria 74.7 3.31e-13   NR MDP9053174.1 1978231 g20597 i0 64.7 2.70967741935484 51 18 54.8 0 4 156 545 595 MDP9053174.1 aminodeoxychorismate synthase component I [Acidobacteriota bacterium] diamond 756 74.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27646720 27646720 PRJNA541476_P_NODE_10304_length_356_cov_1.098940_g10098_i0 PRJNA541476 10304 356 1.09894 3.9122264 Chloracidobacterium sp. CP2_5A 2012633 Bacteria Bacteria 142 1.87e-38   NR OYT71995.1 2012633 g10098 i0 64.7 10.8707865168539 116 40 97.8 1 8 355 65 179 OYT71995.1 MAG: NADP-dependent oxidoreductase [Chloracidobacterium sp. CP2_5A] diamond 3870 142 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium sp. CP2_5A
27773038 27773038 PRJNA541476_P_NODE_4504_length_539_cov_2.231760_g4305_i0 PRJNA541476 4504 539 2.23176 12.0291864 Acidobacteriota bacterium 1978231 Bacteria Bacteria 128 1.9099999999999998e-31   NR MEW6732442.1 1978231 g4305 i0 52 0.951762523191095 171 75 91.8 3 20 514 180 349 MEW6732442.1 hypothetical protein [Acidobacteriota bacterium] diamond 513 128 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27993961 27993961 PRJNA541476_P_NODE_35685_length_245_cov_1.790698_g35479_i0 PRJNA541476 35685 245 1.790698 4.3872101 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 50.4 7.35e-5   NR MFP3938957.1 2651171 g35479 i0 40 0.673469387755102 55 30 63.7 1 2 157 101 155 MFP3938957.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 165 50.4 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28103278 28103278 PRJNA541476_P_NODE_1425_length_996_cov_14.148429_g1279_i0 PRJNA541476 1425 996 14.148429 140.91835284 Pseudomonadati 3379134 Bacteria Bacteria 339 1.19e-102   NR MBS1768271.1 1978231 g1279 i0 48.7 2.13855421686747 355 157 99.7 2 993 1 1030 1383 MBS1768271.1 hypothetical protein [Acidobacteriota bacterium] diamond 2130 341 0.994134897360704 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28877827 28877827 PRJNA541476_P_NODE_8168_length_396_cov_1.399381_g7964_i0 PRJNA541476 8168 396 1.399381 5.54154876 Acidobacteriota bacterium 1978231 Bacteria Bacteria 47.8 0.00343   NR PYT13993.1 1978231 g7964 i0 66.7 0.204545454545455 27 9 20.5 0 7 87 331 357 PYT13993.1 MAG: hypothetical protein DMF51_09540 [Acidobacteriota bacterium] diamond 81 47.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28909191 28909191 PRJNA541476_P_NODE_14348_length_314_cov_2.008299_g14142_i0 PRJNA541476 14348 314 2.008299 6.30605886 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 44.3 0.0251   NR HKG13456.1 2283092 g14142 i0 47.5 0.382165605095541 40 21 38.2 0 215 96 990 1029 HKG13456.1 DNA/RNA non-specific endonuclease [Pyrinomonadaceae bacterium] diamond 120 44.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29113902 29113902 PRJNA541476_P_NODE_26068_length_259_cov_1.763441_g25862_i0 PRJNA541476 26068 259 1.763441 4.56731219 Bacteria 2 Bacteria Bacteria 57.4 2.78e-7   NR PYQ17612.1 1978231 g25862 i0 47 3.08108108108108 66 28 76.4 2 60 257 30 88 PYQ17612.1 MAG: hypothetical protein DMF80_00135 [Acidobacteriota bacterium] diamond 798 57.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29808349 29808349 PRJNA541476_P_NODE_21571_length_275_cov_3.282178_g21365_i0 PRJNA541476 21571 275 3.282178 9.0259895 Pseudomonadati 3379134 Bacteria Bacteria 52 2.97e-5   NR WP_015896997.1 33973 g21365 i0 56.5 1.93090909090909 46 20 50.2 0 1 138 320 365 WP_015896997.1 MULTISPECIES: pyruvate kinase [Acidobacterium] diamond 531 52 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Acidobacterium  
30077722 30077722 PRJNA541476_P_NODE_29292_length_251_cov_2.595506_g29086_i0 PRJNA541476 29292 251 2.595506 6.51472006 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 42.7 0.0373   NR HVO11384.1 2793154 g29086 i0 31.2 0.920318725099602 77 49 87.3 1 232 14 33 109 HVO11384.1 GDSL-type esterase/lipase family protein [Vicinamibacteria bacterium] diamond 231 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
30614898 30614898 PRJNA541476_P_NODE_27873_length_253_cov_4.061111_g27667_i0 PRJNA541476 27873 253 4.061111 10.27461083 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 60.1 2.73e-8   NR HLN02708.1 2212468 g27667 i0 40 2.84584980237154 80 41 87.7 2 31 252 63 141 HLN02708.1 lipase family protein [Bryobacteraceae bacterium] diamond 720 60.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30646356 30646356 PRJNA541476_P_NODE_26633_length_257_cov_2.086957_g26427_i0 PRJNA541476 26633 257 2.086957 5.36347949 Paludibaculum sp. 1962912 Bacteria Bacteria 43.1 0.0256   NR HEY3440495.1 1962912 g26427 i0 38.1 0.735408560311284 63 37 71.2 1 232 50 88 150 HEY3440495.1 hypothetical protein [Paludibaculum sp.] diamond 189 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Paludibaculum Paludibaculum sp.
30709702 30709702 PRJNA541476_P_NODE_35074_length_246_cov_0.901734_g34868_i0 PRJNA541476 35074 246 0.901734 2.21826564 Edaphobacter sp. 1934404 Bacteria Bacteria 78.2 6.08e-16   NR HEV2709111.1 1934404 g34868 i0 50.8 1.69512195121951 65 28 79.3 1 5 199 101 161 HEV2709111.1 HNH endonuclease [Edaphobacter sp.] diamond 417 78.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
31040877 31040877 PRJNA541476_P_NODE_3575_length_613_cov_1.798148_g3382_i0 PRJNA541476 3575 613 1.798148 11.02264724 Pseudomonadati 3379134 Bacteria Bacteria 211 3.2000000000000008e-65   NR WP_013569933.1 870903 g3382 i0 68.7 2.22675367047308 147 46 71.9 0 591 151 99 245 WP_013569933.1 SDR family oxidoreductase [Terriglobus saanensis] diamond 1365 211 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terriglobus Terriglobus saanensis
31183448 31183448 PRJNA541476_P_NODE_37095_length_244_cov_1.228070_g36889_i0 PRJNA541476 37095 244 1.22807 2.9964908 Acidobacteria bacterium OLB17 1617423 Bacteria Bacteria 42.7 0.0356   NR KXK02870.1 1617423 g36889 i0 40 0.614754098360656 50 30 61.5 0 235 86 6 55 KXK02870.1 MAG: hypothetical protein UZ17_ACD001001318 [Acidobacteria bacterium OLB17] diamond 150 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium OLB17
31310092 31310092 PRJNA541476_P_NODE_17495_length_294_cov_1.366516_g17289_i0 PRJNA541476 17495 294 1.366516 4.01755704 Acidobacteriota bacterium 1978231 Bacteria Bacteria 139 4.97e-38   NR MES1211409.1 1978231 g17289 i0 62.2 3 98 35 100 1 1 294 163 258 MES1211409.1 bifunctional aspartate kinase/diaminopimelate decarboxylase [Acidobacteriota bacterium] diamond 882 139 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31373599 31373599 PRJNA541476_P_NODE_10516_length_353_cov_1.960714_g10310_i0 PRJNA541476 10516 353 1.960714 6.92132042 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 47 0.00415   NR HEX3878382.1 2212468 g10310 i0 35.1 0.654390934844193 77 46 62 2 108 326 558 634 HEX3878382.1 caspase family protein [Bryobacteraceae bacterium] diamond 231 47 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31816224 31816224 PRJNA541476_P_NODE_2577_length_735_cov_1.283988_g2392_i0 PRJNA541476 2577 735 1.283988 9.4373118 Blastocatellia bacterium 2052146 Bacteria Bacteria 47 0.0493   NR MFN0121065.1 2052146 g2392 i0 27.6 0.857142857142857 210 118 78.4 9 97 672 197 390 MFN0121065.1 PQQ-binding-like beta-propeller repeat protein [Blastocatellia bacterium] diamond 630 47 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
32544246 32544246 PRJNA541476_P_NODE_31539_length_249_cov_1.431818_g31333_i0 PRJNA541476 31539 249 1.431818 3.56522682 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 53.5 6.19e-6   NR HEV8582174.1 2651171 g31333 i0 40.8 1.62650602409639 76 33 86.7 4 33 248 70 137 HEV8582174.1 Vps62-related protein [Thermoanaerobaculia bacterium] diamond 405 53.5 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
32575818 32575818 PRJNA541476_P_NODE_7199_length_421_cov_1.758621_g6995_i0 PRJNA541476 7199 421 1.758621 7.40379441 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 60.1 1.75e-7   NR HKC55295.1 2910147 g6995 i0 38.7 2.26603325415677 106 59 74.8 4 315 1 31 131 HKC55295.1 phycobilisome rod-core linker polypeptide [Vicinamibacterales bacterium] diamond 954 60.1 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32858947 32858947 PRJNA541476_P_NODE_32540_length_248_cov_1.485714_g32334_i0 PRJNA541476 32540 248 1.485714 3.68457072 Acidobacteriota bacterium 1978231 Bacteria Bacteria 62 6.2e-9   NR TDI13400.1 1978231 g32334 i0 38.6 1.70564516129032 70 35 84.7 1 211 2 310 371 TDI13400.1 MAG: M20/M25/M40 family metallo-hydrolase [Acidobacteriota bacterium] diamond 423 62 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;