RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA541476" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA541476 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26666098 26666098 PRJNA541476_P_NODE_4761_length_522_cov_1.875278_g4561_i0 PRJNA541476 4761 522 1.875278 9.78895116 rice-associated noda-like virus 2 2966239 Viruses Viruses 47.8 0.00844   NR UTU02166.1 2966239 g4561 i0 32.4 0.620689655172414 108 57 56.9 4 471 175 278 378 UTU02166.1 capsid protein [rice-associated noda-like virus 2] diamond 324 47.8 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   rice-associated noda-like virus 2
27394136 27394136 PRJNA541476_P_NODE_7783_length_405_cov_2.548193_g7579_i0 PRJNA541476 7783 405 2.548193 10.32018165 rice-associated noda-like virus 2 2966239 Viruses Viruses 99 1.91e-21   NR UTU02166.1 2966239 g7579 i0 60.2 0.614814814814815 83 33 61.5 0 249 1 39 121 UTU02166.1 capsid protein [rice-associated noda-like virus 2] diamond 249 99 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   rice-associated noda-like virus 2
32858943 32858943 PRJNA541476_P_NODE_27740_length_254_cov_1.425414_g27534_i0 PRJNA541476 27740 254 1.425414 3.62055156 rice-associated noda-like virus 2 2966239 Viruses Viruses 90.1 5.16e-19   NR UTU02166.1 2966239 g27534 i0 61.3 0.885826771653543 75 28 87.4 1 254 33 189 263 UTU02166.1 capsid protein [rice-associated noda-like virus 2] diamond 225 90.1 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   rice-associated noda-like virus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;