RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA540466" and tax_clade = "Metamonada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Metamonada · 21 ✖

bioproject 1

  • PRJNA540466 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13872307 13872307 PRJNA540466_S_NODE_43571_length_280_cov_1.082126_g43022_i0 PRJNA540466 43571 280 1.082126 3.0299528 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 78.6 1.52e-14   NR KAJ5078301.1 1746090 g43022 i0 40.7 10.95 86 49 92.1 1 264 7 943 1026 KAJ5078301.1 leucine-rich repeat protein soc-2 [Anaeramoeba ignava] diamond 3066 78.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
24734215 24734215 PRJNA540466_S_NODE_63620_length_242_cov_0.911243_g63071_i0 PRJNA540466 63620 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 122 2.73e-33   NR XP_067778009.1 135588 g63071 i0 80.6 1.78512396694215 72 14 89.3 0 2 217 98 169 XP_067778009.1 peptidyl-prolyl cis-trans isomerase [Histomonas meleagridis] diamond 432 122 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
26888225 26888225 PRJNA540466_S_NODE_32481_length_317_cov_2.872951_g31932_i0 PRJNA540466 32481 317 2.872951 9.10725467 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 121 1.83e-29   NR KAJ5069892.1 1746090 g31932 i0 58.1 0.993690851735016 105 39 94.6 1 1 300 1264 1368 KAJ5069892.1 sodium/potassium-transporting atpase subunit alpha [Anaeramoeba ignava] diamond 315 121 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
27046265 27046265 PRJNA540466_S_NODE_39622_length_291_cov_2.288991_g39073_i0 PRJNA540466 39622 291 2.288991 6.66096381 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 74.3 1.8e-13   NR KAJ3439347.1 1746091 g39073 i0 46.6 2.29896907216495 88 46 90.7 1 267 4 56 142 KAJ3439347.1 thioredoxin-like protein [Anaeramoeba flamelloides] diamond 669 74.3 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
27109239 27109239 PRJNA540466_S_NODE_12942_length_480_cov_3.842752_g12398_i0 PRJNA540466 12942 480 3.842752 18.4452096 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 60.8 1.65e-7   NR KAJ4453645.1 342808 g12398 i0 36.7 0.49375 79 50 49.4 0 480 244 100 178 KAJ4453645.1 hypothetical protein PAPYR_11832 [Paratrimastix pyriformis] diamond 237 60.8 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27425738 27425738 PRJNA540466_S_NODE_51483_length_261_cov_1.659574_g50934_i0 PRJNA540466 51483 261 1.659574 4.33148814 Streblomastix strix 222440 Preaxostyla other_Eukaryota 142 7.22e-42   NR KAA6384362.1 222440 g50934 i0 74.4 1.88505747126437 82 21 94.3 0 14 259 11 92 KAA6384362.1 MAG: putative FKBP-type peptidyl-prolyl cis-trans isomerase [Streblomastix strix] diamond 492 142 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
27678370 27678370 PRJNA540466_S_NODE_37724_length_297_cov_3.352679_g37175_i0 PRJNA540466 37724 297 3.352679 9.95745663 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 112 1.3600000000000002e-27   NR KAG9390653.1 201153 g37175 i0 53.1 4.08080808080808 98 40 99 2 295 2 159 250 KAG9390653.1 Papain family cysteine protease [Carpediemonas membranifera] diamond 1212 112 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
28166685 28166685 PRJNA540466_S_NODE_21565_length_382_cov_2.491909_g21016_i0 PRJNA540466 21565 382 2.491909 9.51909238 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.9 3.13e-4   NR CAK8772847.1 28002 g21016 i0 38.2 2.98429319371728 68 38 53.4 1 308 105 7 70 CAK8772847.1 HINF_100844 [Hexamita inflata] diamond 1140 49.3 0.991886409736308 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
28846126 28846126 PRJNA540466_S_NODE_17348_length_422_cov_3.710602_g16799_i0 PRJNA540466 17348 422 3.710602 15.65874044 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 99 1.98e-22   NR KAJ5074052.1 1746090 g16799 i0 40 1.72748815165877 120 71 85.3 1 4 363 114 232 KAJ5074052.1 hypothetical protein M0811_00680 [Anaeramoeba ignava] diamond 729 99 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
28972737 28972737 PRJNA540466_S_NODE_48568_length_267_cov_2.649485_g48019_i0 PRJNA540466 48568 267 2.649485 7.07412495 Giardia muris 5742 Fornicata other_Eukaryota 50.1 1.36e-4   NR TNJ28442.1 5742 g48019 i0 50 0.51685393258427 46 23 51.7 0 267 130 714 759 TNJ28442.1 High cysteine membrane protein [Giardia muris] diamond 138 50.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
29225477 29225477 PRJNA540466_S_NODE_64469_length_239_cov_3.240964_g63920_i0 PRJNA540466 64469 239 3.240964 7.74590396 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 73.6 4.97e-13   NR KAJ5070361.1 1746090 g63920 i0 68 0.627615062761506 50 16 62.8 0 187 38 967 1016 KAJ5070361.1 hypothetical protein M0811_11027 [Anaeramoeba ignava] diamond 150 73.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
29555689 29555689 PRJNA540466_S_NODE_36010_length_303_cov_3.873913_g35461_i0 PRJNA540466 36010 303 3.873913 11.73795639 Oxymonadida 66288 Preaxostyla other_Eukaryota 123 2.88e-33   NR KAA6388004.1 222440 g35461 i0 62.8 1.7029702970297 86 32 85.1 0 302 45 82 167 KAA6388004.1 MAG: putative Translationally-controlled tumor protein [Streblomastix strix] diamond 516 123 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
29603709 29603709 PRJNA540466_S_NODE_10130_length_531_cov_2.975983_g9598_i0 PRJNA540466 10130 531 2.975983 15.80246973 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 58.9 1.32e-6   NR KAJ5077386.1 1746090 g9598 i0 35.1 0.531073446327684 94 58 52.5 2 7 285 62 153 KAJ5077386.1 ras-related protein rab-13 [Anaeramoeba ignava] diamond 282 58.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
29793380 29793380 PRJNA540466_S_NODE_44731_length_276_cov_4.729064_g44182_i0 PRJNA540466 44731 276 4.729064 13.05221664 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 80.9 1.69e-15   NR KAJ5072157.1 1746090 g44182 i0 54.5 0.83695652173913 77 35 83.7 0 251 21 241 317 KAJ5072157.1 nucleic acid binding protein [Anaeramoeba ignava] diamond 231 80.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
29856688 29856688 PRJNA540466_S_NODE_64131_length_240_cov_3.227545_g63582_i0 PRJNA540466 64131 240 3.227545 7.746108 Giardia intestinalis ATCC 5 5741 Fornicata other_Eukaryota 65.5 6.51e-11   NR EES99890.1 598745 g63582 i0 65.9 1.6625 44 15 55 0 93 224 135 178 EES99890.1 Hypothetical protein GL50581_2875 [Giardia intestinalis ATCC 50581] diamond 399 65.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
29888446 29888446 PRJNA540466_S_NODE_49231_length_266_cov_1.212435_g48682_i0 PRJNA540466 49231 266 1.212435 3.2250771 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 95.5 3.9900000000000005e-21   NR KAJ6228763.1 1746091 g48682 i0 56.7 0.755639097744361 67 29 75.6 0 259 59 275 341 KAJ6228763.1 guanine nucleotide-binding protein g(o) subunit alpha [Anaeramoeba flamelloides] diamond 201 95.5 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
30109396 30109396 PRJNA540466_S_NODE_4972_length_675_cov_4.858804_g4563_i0 PRJNA540466 4972 675 4.858804 32.796927 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 67.8 4.54e-9   NR KAJ3451993.1 1746091 g4563 i0 24.4 0.875555555555556 197 138 83.6 3 672 109 668 862 KAJ3451993.1 cnh domain containing [Anaeramoeba flamelloides] diamond 591 67.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31405207 31405207 PRJNA540466_S_NODE_49576_length_265_cov_1.973958_g49027_i0 PRJNA540466 49576 265 1.973958 5.2309887 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 63.9 7.95e-10   NR XP_067733485.1 2049356 g49027 i0 53.7 1.24528301886792 54 25 61.1 0 99 260 61 114 XP_067733485.1 putative leucine-rich repeat-containing protein [Monocercomonoides exilis] diamond 330 63.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
31531758 31531758 PRJNA540466_S_NODE_6356_length_626_cov_4.529837_g5904_i0 PRJNA540466 6356 626 4.529837 28.35677962 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 67.8 3.16e-9   NR KAJ4459036.1 342808 g5904 i0 54.5 0.263578274760383 55 25 26.4 0 4 168 674 728 KAJ4459036.1 hypothetical protein PAPYR_5087 [Paratrimastix pyriformis] diamond 165 67.8 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31595053 31595053 PRJNA540466_S_NODE_31256_length_322_cov_28.385542_g30707_i0 PRJNA540466 31256 322 28.385542 91.40144524 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 45.8 7.89e-4   NR KAJ5077667.1 1746090 g30707 i0 36.2 1.82608695652174 69 44 64.3 0 279 73 1 69 KAJ5077667.1 centromere protein x [Anaeramoeba ignava] diamond 588 45.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
31752902 31752902 PRJNA540466_S_NODE_44717_length_276_cov_6.798030_g44168_i0 PRJNA540466 44717 276 6.79803 18.7625628 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 45.4 0.00108   NR XP_067762115.1 348837 g44168 i0 40 0.597826086956522 55 32 59.8 1 63 227 42 95 XP_067762115.1 Dynein light chain [Spironucleus salmonicida] diamond 165 45.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;