RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA534016" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA534016 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27615039 27615039 PRJNA534016_P_NODE_16844_length_244_cov_0.900585_g16754_i0 PRJNA534016 16844 244 0.900585 2.1974274 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 55.1 1.66e-6   NR XP_012756375.1 1410327 g16754 i0 40.5 0.971311475409836 79 38 97.1 3 1 237 107 176 XP_012756375.1 hypothetical protein SAMD00019534_027880 [Acytostelium subglobosum LB1] diamond 237 55.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
27678348 27678348 PRJNA534016_P_NODE_9664_length_282_cov_0.985646_g9574_i0 PRJNA534016 9664 282 0.985646 2.77952172 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 92.4 9.95e-20   NR PRP81590.1 1890364 g9574 i0 55.4 0.787234042553192 74 33 78.7 0 59 280 15 88 PRP81590.1 hypothetical protein PROFUN_01097 [Planoprotostelium fungivorum] diamond 222 92.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31057600 31057600 PRJNA534016_P_NODE_11635_length_266_cov_1.595855_g11545_i0 PRJNA534016 11635 266 1.595855 4.2449743 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 56.2 8.92e-7   NR XP_004258468.1 370355 g11545 i0 42.7 0.924812030075188 82 44 90.2 2 27 266 35 115 XP_004258468.1 cysteine protease, putative [Entamoeba invadens IP1] diamond 246 56.2 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
32827449 32827449 PRJNA534016_P_NODE_15280_length_248_cov_0.880000_g15190_i0 PRJNA534016 15280 248 0.88 2.1824 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 62 6.66e-9   NR PRP80242.1 1890364 g15190 i0 45.8 0.713709677419355 59 32 71.4 0 3 179 2868 2926 PRP80242.1 hypothetical protein PROFUN_12181 [Planoprotostelium fungivorum] diamond 177 62 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;