RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA534016" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA534016 · 17 ✖

analysis 1

  • diamond · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4334364 4334364 PRJNA534016_P_NODE_12924_length_256_cov_1.677596_g12834_i0 PRJNA534016 12924 256 1.677596 4.29464576 Candida verbasci 1227364 Fungi Fungi 108 9.07e-29   NR CAI5760403.1 1227364 g12834 i0 69.4 5.0859375 72 22 84.4 0 252 37 15 86 CAI5760403.1 unnamed protein product [Candida verbasci] diamond 1302 108 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida verbasci
11986230 11986230 PRJNA534016_P_NODE_17110_length_244_cov_0.859649_g17020_i0 PRJNA534016 17110 244 0.859649 2.09754356 Eukaryota 2759 Fungi Fungi 100 2.15e-22   NR KAI5293593.1 51565 g17020 i0 57.1 6.57786885245902 77 32 93.4 1 234 7 332 408 KAI5293593.1 hypothetical protein KEM52_005396 [Ascosphaera acerosa] diamond 1605 101 0.99009900990099 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Onygenales Ascosphaeraceae Ascosphaera Ascosphaera acerosa
18358945 18358945 PRJNA534016_P_NODE_12715_length_258_cov_1.400000_g12625_i0 PRJNA534016 12715 258 1.4 3.612 Ascobolus immersus RN42 1160509 Fungi Fungi 142 2.7199999999999997e-37   NR RPA82171.1 1160509 g12625 i0 80 0.988372093023256 85 17 98.8 0 3 257 583 667 RPA82171.1 aconitase [Ascobolus immersus RN42] diamond 255 142 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Ascobolaceae Ascobolus Ascobolus immersus
19633514 19633514 PRJNA534016_P_NODE_10236_length_277_cov_1.509804_g10146_i0 PRJNA534016 10236 277 1.509804 4.18215708 Eukaryota 2759 Fungi Fungi 156 4.7799999999999986e-43   NR KAK3615690.1 574655 g10146 i0 81.3 92.6425992779783 91 17 98.6 0 3 275 253 343 KAK3615690.1 RuvB ATP-dependent DNA helicase pontin [Elasticomyces elasticus] diamond 25662 157 0.993630573248408 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Teratosphaeriaceae Elasticomyces Elasticomyces elasticus
26634555 26634555 PRJNA534016_P_NODE_13761_length_251_cov_0.865169_g13671_i0 PRJNA534016 13761 251 0.865169 2.17157419 Lipomyces arxii 56418 Fungi Fungi 43.9 0.0161   NR XP_066770316.1 56418 g13671 i0 52.2 0.549800796812749 46 22 55 0 73 210 421 466 XP_066770316.1 nucleolar complex-associated protein-domain-containing protein [Lipomyces arxii] diamond 138 43.9 1 Eukaryota Opisthokonta Fungi Ascomycota Lipomycetes Lipomycetales Lipomycetaceae Lipomyces Lipomyces arxii
26729183 26729183 PRJNA534016_P_NODE_17941_length_242_cov_0.911243_g17851_i0 PRJNA534016 17941 242 0.911243 2.20520806 Podospora appendiculata 314037 Fungi Fungi 62.8 7.07e-10   NR KAK3693545.1 314037 g17851 i0 49.2 1.66115702479339 65 33 80.6 0 197 3 28 92 KAK3693545.1 ubiquitin-conjugating enzyme/RWD-like protein [Podospora appendiculata] diamond 402 62.8 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Podosporaceae Podospora Podospora appendiculata
26951077 26951077 PRJNA534016_P_NODE_7022_length_319_cov_1.113821_g6932_i0 PRJNA534016 7022 319 1.113821 3.55308899 Scedosporium apiospermum 563466 Fungi Fungi 66.6 1.33e-11   NR XP_016642949.1 563466 g6932 i0 61.3 1.09090909090909 62 21 58.3 1 2 187 16 74 XP_016642949.1 DNA-(apurinic or apyrimidinic site) lyase [Scedosporium apiospermum] diamond 348 66.6 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales Microascaceae Scedosporium Scedosporium apiospermum
27520143 27520143 PRJNA534016_P_NODE_11003_length_271_cov_1.555556_g10913_i0 PRJNA534016 11003 271 1.555556 4.21555676 Sphaerosporella brunnea 1250544 Fungi Fungi 93.6 1.59e-22   NR KAA8892592.1 1250544 g10913 i0 56.6 2.60147601476015 76 32 84.1 1 40 267 11 85 KAA8892592.1 hypothetical protein FN846DRAFT_896715 [Sphaerosporella brunnea] diamond 705 93.6 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Pyronemataceae Sphaerosporella Sphaerosporella brunnea
27898878 27898878 PRJNA534016_P_NODE_16005_length_246_cov_0.890173_g15915_i0 PRJNA534016 16005 246 0.890173 2.18982558 Dothistroma septosporum NZE1 64363 Fungi Fungi 42.7 0.0377   NR EME43200.1 675120 g15915 i0 37.1 0.75609756097561 62 39 75.6 0 234 49 156 217 EME43200.1 hypothetical protein DOTSEDRAFT_72548 [Dothistroma septosporum NZE10] diamond 186 42.7 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Dothistroma Dothistroma septosporum
28640369 28640369 PRJNA534016_P_NODE_13427_length_252_cov_1.620112_g13337_i0 PRJNA534016 13427 252 1.620112 4.08268224 Talaromyces 5094 Fungi Fungi 150 4.07e-40   NR KAL3702653.1 37727 g13337 i0 78.7 4.47619047619048 94 2 90.5 1 229 2 118 211 KAL3702653.1 hypothetical protein TMatcc_011232 [Talaromyces marneffei] diamond 1128 150 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Trichocomaceae Talaromyces Talaromyces marneffei
28829525 28829525 PRJNA534016_P_NODE_17928_length_242_cov_0.911243_g17838_i0 PRJNA534016 17928 242 0.911243 2.20520806 Hypocreales 5125 Fungi Fungi 107 3.41e-26   NR KAF5690028.1 48490 g17838 i0 60.5 9.60743801652893 76 30 94.2 0 238 11 172 247 KAF5690028.1 members of the aldo keto reductase family [Fusarium circinatum] diamond 2325 108 0.990740740740741 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium circinatum
28846093 28846093 PRJNA534016_P_NODE_14888_length_248_cov_2.348571_g14798_i0 PRJNA534016 14888 248 2.348571 5.82445608 Aspergillus steynii IBT 23 306088 Fungi Fungi 62 9.69e-10   NR XP_024698185.1 1392250 g14798 i0 46.5 0.858870967741935 71 37 84.7 1 34 243 58 128 XP_024698185.1 uncharacterized protein P170DRAFT_419945 [Aspergillus steynii IBT 23096] diamond 213 62 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus steynii
29650115 29650115 PRJNA534016_P_NODE_12870_length_256_cov_2.644809_g12780_i0 PRJNA534016 12870 256 2.644809 6.77071104 Fungi 4751 Fungi Fungi 43.9 0.0139   NR XP_022630293.1 1245769 g12780 i0 44.8 1.20703125 58 30 66.8 2 187 17 31 87 XP_022630293.1 histone H1 [Lachancea lanzarotensis] diamond 309 43.9 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Lachancea Lachancea lanzarotensis
29666855 29666855 PRJNA534016_P_NODE_16390_length_245_cov_0.895349_g16300_i0 PRJNA534016 16390 245 0.895349 2.19360505 Oidiodendron maius Zn 913774 Fungi Fungi 43.1 0.0288   NR KIN07530.1 913774 g16300 i0 41.2 0.83265306122449 68 26 74.7 4 242 60 559 619 KIN07530.1 hypothetical protein OIDMADRAFT_151137 [Oidiodendron maius Zn] diamond 204 43.1 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes   Myxotrichaceae Oidiodendron Oidiodendron maius
30661437 30661437 PRJNA534016_P_NODE_7373_length_311_cov_11.563025_g7283_i0 PRJNA534016 7373 311 11.563025 35.96100775 Saccharomycetaceae 4893 Fungi Fungi 63.2 6.9e-10   NR KAF4001137.1 4932 g7283 i0 54.5 3.16398713826367 66 20 63.7 1 2 199 51 106 KAF4001137.1 Protein TAR1 domain protein [Saccharomyces cerevisiae] diamond 984 63.5 0.995275590551181 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
32147606 32147606 PRJNA534016_P_NODE_14398_length_250_cov_0.870056_g14308_i0 PRJNA534016 14398 250 0.870056 2.17514 Fungi 4751 Fungi Fungi 90.5 6.19e-19   NR KAG0128210.1 55307 g14308 i0 57.8 6.972 83 35 99.6 0 1 249 38 120 KAG0128210.1 phosphate transporter [Tuber indicum] diamond 1743 90.5 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Tuberaceae Tuber Tuber indicum
32810787 32810787 PRJNA534016_P_NODE_9460_length_283_cov_1.833333_g9370_i0 PRJNA534016 9460 283 1.833333 5.18833239 root 1 Root_unresolved Root_unresolved 44.3 0.00537   NR VBB79485.1 48703 g9370 i0 35.2 2.45936395759717 71 46 75.3 0 19 231 10 80 VBB79485.1 Putative protein of unknown function [Podospora comata] diamond 696 44.3 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Podosporaceae Podospora Podospora comata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;