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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA534016" and tax_clade = "FCB group"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 20 ✖

bioproject 1

  • PRJNA534016 · 20 ✖

analysis 1

  • diamond · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14536356 14536356 PRJNA534016_P_NODE_19092_length_228_cov_2.296774_g19002_i0 PRJNA534016 19092 228 2.296774 5.23664472 Chryseolinea sp. 2059303 Bacteria Bacteria 149 1.79e-42   NR HTE31778.1 2059303 g19002 i0 92.1 4 76 6 100 0 228 1 88 163 HTE31778.1 ketol-acid reductoisomerase [Chryseolinea sp.] diamond 912 149 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Fulvivirgaceae Chryseolinea Chryseolinea sp.
26776429 26776429 PRJNA534016_P_NODE_18861_length_233_cov_2.168750_g18771_i0 PRJNA534016 18861 233 2.16875 5.0531875 Pseudomonadati 3379134 Bacteria Bacteria 53.5 5.04e-6   NR MFA8450429.1 2030927 g18771 i0 56.1 0.965665236051502 41 16 52.8 1 125 3 421 459 MFA8450429.1 hypothetical protein [Bacteroidales bacterium] diamond 225 53.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
26966144 26966144 PRJNA534016_P_NODE_8502_length_291_cov_2.678899_g8412_i0 PRJNA534016 8502 291 2.678899 7.79559609 Bacteria 2 Bacteria Bacteria 50.8 9.73e-5   NR MES2332513.1 1898104 g8412 i0 42.7 1.61855670103093 82 41 78.4 2 12 239 1123 1204 MES2332513.1 HYR domain-containing protein [Bacteroidota bacterium] diamond 471 51.2 0.9921875 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27172409 27172409 PRJNA534016_P_NODE_18302_length_241_cov_0.916667_g18212_i0 PRJNA534016 18302 241 0.916667 2.20916747 Draconibacterium orientale 1168034 Bacteria Bacteria 77.4 2.29e-14   NR WP_139178298.1 1168034 g18212 i0 48.1 2.9253112033195 79 39 95.9 1 1 231 1007 1085 WP_139178298.1 hypothetical protein, partial [Draconibacterium orientale] diamond 705 77.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Marinilabiliales Prolixibacteraceae Draconibacterium Draconibacterium orientale
27425681 27425681 PRJNA534016_P_NODE_11143_length_270_cov_1.467005_g11053_i0 PRJNA534016 11143 270 1.467005 3.9609135 Maribacter sp. 23 1897614 Bacteria Bacteria 43.1 0.036   NR WP_413978024.1 3386274 g11053 i0 33.3 0.733333333333333 66 42 73.3 1 23 220 194 257 WP_413978024.1 oligosaccharide flippase family protein [Maribacter sp. 2307UL18-2] diamond 198 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Maribacter Maribacter sp. 2307UL18-2
28751534 28751534 PRJNA534016_P_NODE_18487_length_241_cov_0.857143_g18397_i0 PRJNA534016 18487 241 0.857143 2.06571463 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 43.1 0.0242   NR MEQ9437565.1 2099675 g18397 i0 36.2 0.858921161825726 69 39 82.2 2 233 36 163 229 MEQ9437565.1 sterol desaturase family protein [Cyclobacteriaceae bacterium] diamond 207 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
29004580 29004580 PRJNA534016_P_NODE_10588_length_274_cov_2.079602_g10498_i0 PRJNA534016 10588 274 2.079602 5.69810948 Chryseobacterium lactis 1241981 Bacteria Bacteria 46.6 0.00205   NR WP_185287878.1 1241981 g10498 i0 37.3 0.733576642335766 67 41 72.3 1 263 66 18 84 WP_185287878.1 FRG domain-containing protein [Chryseobacterium lactis] diamond 201 46.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium lactis
29130603 29130603 PRJNA534016_P_NODE_4089_length_407_cov_2.104790_g3999_i0 PRJNA534016 4089 407 2.10479 8.5664953 Mangrovibacterium sp. 1961364 Bacteria Bacteria 79.3 3.53e-14   NR MDD4191831.1 1961364 g3999 i0 38.1 1.54791154791155 105 60 75.9 3 98 406 138 239 MDD4191831.1 helicase associated domain-containing protein [Mangrovibacterium sp.] diamond 630 79.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Marinilabiliales Prolixibacteraceae Mangrovibacterium Mangrovibacterium sp.
29145695 29145695 PRJNA534016_P_NODE_6749_length_324_cov_3.318725_g6659_i0 PRJNA534016 6749 324 3.318725 10.752669 Candidatus Brachybacter 2981994 Bacteria Bacteria 44.7 0.02   NR MBP7541559.1 2202734 g6659 i0 39.3 2.25925925925926 61 20 53.7 3 93 266 162 208 MBP7541559.1 T9SS type A sorting domain-containing protein [Saprospiraceae bacterium] diamond 732 44.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Saprospiraceae   Saprospiraceae bacterium
29319833 29319833 PRJNA534016_P_NODE_9069_length_286_cov_2.098592_g8979_i0 PRJNA534016 9069 286 2.098592 6.00197312 Bacteroidota bacterium 1898104 Bacteria Bacteria 152 2.15e-41   NR MEL6802172.1 1898104 g8979 i0 79.6 0.975524475524476 93 19 97.6 0 3 281 329 421 MEL6802172.1 reverse transcriptase domain-containing protein [Bacteroidota bacterium] diamond 279 152 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
30503533 30503533 PRJNA534016_P_NODE_193_length_1626_cov_12.252415_g171_i0 PRJNA534016 193 1626 12.252415 199.2242679 Pseudomonadati 3379134 Bacteria Bacteria 100 5.78e-18   NR NQX80861.1 1871037 g171 i0 31.5 1.67527675276753 197 100 31.5 6 1091 579 316 503 NQX80861.1 hypothetical protein [Flavobacteriaceae bacterium] diamond 2724 100 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae   Flavobacteriaceae bacterium
31151640 31151640 PRJNA534016_P_NODE_2055_length_571_cov_2.224900_g1967_i0 PRJNA534016 2055 571 2.2249 12.704179 unclassified Tenacibaculum 2635139 Bacteria Bacteria 69.7 2.97e-10   NR WP_235272807.1 2635139 g1967 i0 45.1 0.430823117338003 82 43 42.6 2 570 328 214 294 WP_235272807.1 MULTISPECIES: hypothetical protein [unclassified Tenacibaculum] diamond 246 69.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Tenacibaculum  
31563425 31563425 PRJNA534016_P_NODE_12456_length_260_cov_1.304813_g12366_i0 PRJNA534016 12456 260 1.304813 3.3925138 Flavobacterium 237 Bacteria Bacteria 114 3.0800000000000004e-27   NR WP_024981211.1 237 g12366 i0 96.6 0.680769230769231 59 2 68.1 0 179 3 1 59 WP_024981211.1 MULTISPECIES: SusC/RagA family TonB-linked outer membrane protein [Flavobacterium] diamond 177 114 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium  
31626348 31626348 PRJNA534016_P_NODE_12296_length_261_cov_1.622340_g12206_i0 PRJNA534016 12296 261 1.62234 4.2343074 Flavobacterium 237 Bacteria Bacteria 47.8 7.42e-4   NR WP_024980429.1 237 g12206 i0 83.3 0.620689655172414 54 9 62.1 0 259 98 292 345 WP_024980429.1 MULTISPECIES: OmpH family outer membrane protein [Flavobacterium] diamond 162 47.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium  
31879286 31879286 PRJNA534016_P_NODE_5577_length_353_cov_1.435714_g5487_i0 PRJNA534016 5577 353 1.435714 5.06807042 Bacteroidia bacterium 2044936 Bacteria Bacteria 68.2 1.6e-10   NR MBX7201664.1 2044936 g5487 i0 41.3 1.55524079320113 92 51 77.3 3 312 40 60 149 MBX7201664.1 choice-of-anchor L domain-containing protein [Bacteroidia bacterium] diamond 549 68.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia       Bacteroidia bacterium
32259475 32259475 PRJNA534016_P_NODE_11218_length_269_cov_1.989796_g11128_i0 PRJNA534016 11218 269 1.989796 5.35255124 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 164 6.16e-47   NR HEY0730840.1 1869212 g11128 i0 83.1 9.89219330855019 89 15 99.3 0 1 267 176 264 HEY0730840.1 NAD-dependent formate dehydrogenase [Chitinophagaceae bacterium] diamond 2661 164 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
32322771 32322771 PRJNA534016_P_NODE_17899_length_242_cov_0.911243_g17809_i0 PRJNA534016 17899 242 0.911243 2.20520806 Flavobacterium 237 Bacteria Bacteria 168 2.18e-46   NR WP_024982432.1 237 g17809 i0 97.5 0.991735537190083 80 2 99.2 0 1 240 465 544 WP_024982432.1 MULTISPECIES: SusC/RagA family TonB-linked outer membrane protein [Flavobacterium] diamond 240 168 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium  
32354377 32354377 PRJNA534016_P_NODE_19199_length_226_cov_2.013072_g19109_i0 PRJNA534016 19199 226 2.013072 4.54954272 Pedobacter cryoconitis 188932 Bacteria Bacteria 147 4.6e-39   NR WP_317617741.1 188932 g19109 i0 100 0.982300884955752 74 0 98.2 0 224 3 533 606 WP_317617741.1 translocation/assembly module TamB domain-containing protein [Pedobacter cryoconitis] diamond 222 147 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter cryoconitis
32527517 32527517 PRJNA534016_P_NODE_10159_length_278_cov_1.190244_g10069_i0 PRJNA534016 10159 278 1.190244 3.30887832 FCB group 1783270 Bacteria Bacteria 136 1.64e-37   NR MFK7844943.1 2306054 g10069 i0 72.8 9.96043165467626 92 25 99.3 0 277 2 114 205 MFK7844943.1 3-hydroxyacyl-CoA dehydrogenase [Rhodothermales bacterium] diamond 2769 136 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
32575748 32575748 PRJNA534016_P_NODE_3999_length_411_cov_3.275148_g3909_i0 PRJNA534016 3999 411 3.275148 13.46085828 Bacteroidota bacterium 1898104 Bacteria Bacteria 106 1.5199999999999995e-23   NR MEL6561794.1 1898104 g3909 i0 48.2 1 137 71 100 0 411 1 606 742 MEL6561794.1 reverse transcriptase domain-containing protein [Bacteroidota bacterium] diamond 411 106 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;