RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA533623" and tax_phylum = "Parabasalia"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA533623 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9434539 9434539 PRJNA533623_P_NODE_28208_length_429_cov_33.494565_g26438_i0 PRJNA533623 28208 429 33.494565 143.69168385 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 203 4.56e-65   NR XP_068367377.1 1144522 g26438 i0 87.6 0.79020979020979 113 14 79 0 394 56 1 113 XP_068367377.1 ribosomal protein L24e [Tritrichomonas foetus] diamond 339 203 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
13260555 13260555 PRJNA533623_P_NODE_51711_length_286_cov_28.440000_g49932_i0 PRJNA533623 51711 286 28.44 81.3384 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 134 3.77e-37   NR XP_068367621.1 1144522 g49932 i0 85.7 0.734265734265734 70 10 73.4 0 262 53 146 215 XP_068367621.1 Peroxiredoxin-1 [Tritrichomonas foetus] diamond 210 134 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
14534658 14534658 PRJNA533623_P_NODE_13232_length_647_cov_45.549488_g11564_i0 PRJNA533623 13232 647 45.549488 294.70518736 Tritrichomonas musculus 1915356 Parabasalia other_Eukaryota 409 5.549999999999999e-144   NR KAK8835243.1 1915356 g11564 i0 97.4 0.904173106646059 195 5 90.4 0 615 31 1 195 KAK8835243.1 Superoxide dismutase [Mn], mitochondrial [Tritrichomonas musculus] diamond 585 409 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas musculus
15809165 15809165 PRJNA533623_P_NODE_39333_length_348_cov_47.477352_g37559_i0 PRJNA533623 39333 348 47.477352 165.22118496 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 158 3.09e-47   NR XP_068360519.1 1144522 g37559 i0 81.8 0.853448275862069 99 18 85.3 0 22 318 36 134 XP_068360519.1 ribosomal protein S24e [Tritrichomonas foetus] diamond 297 158 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
17083219 17083219 PRJNA533623_P_NODE_11514_length_693_cov_27.756329_g9901_i0 PRJNA533623 11514 693 27.756329 192.35135997 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 230 9.610000000000001e-73   NR XP_068365351.1 1144522 g9901 i0 58.3 0.831168831168831 192 74 82.7 2 47 619 2 188 XP_068365351.1 uncharacterized protein TRFO_18128 [Tritrichomonas foetus] diamond 576 230 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
18357470 18357470 PRJNA533623_P_NODE_18855_length_539_cov_31.405858_g17115_i0 PRJNA533623 18855 539 31.405858 169.27757462 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 260 1.9e-86   NR XP_067770388.1 135588 g17115 i0 93.6 0.779220779220779 140 9 77.9 0 505 86 1 140 XP_067770388.1 60S ribosomal protein L23 [Histomonas meleagridis] diamond 420 260 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
20908198 20908198 PRJNA533623_P_NODE_26557_length_445_cov_55.328125_g24788_i0 PRJNA533623 26557 445 55.328125 246.21015625 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 149 3.49e-43   NR XP_068354933.1 1144522 g24788 i0 66.4 0.842696629213483 125 40 82.9 1 43 411 1 125 XP_068354933.1 translation elongation factor 1 beta [Tritrichomonas foetus] diamond 375 149 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
20908755 20908755 PRJNA533623_P_NODE_5097_length_1006_cov_41.954497_g3887_i0 PRJNA533623 5097 1006 41.954497 422.06223982 Tritrichomonas musculus 1915356 Parabasalia other_Eukaryota 258 5.880000000000001e-79   NR KAK8834713.1 1915356 g3887 i0 41 0.915506958250497 307 177 90.4 1 970 62 109 415 KAK8834713.1 hypothetical protein M9Y10_026129 [Tritrichomonas musculus] diamond 921 258 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas musculus
22182791 22182791 PRJNA533623_P_NODE_22098_length_493_cov_86.428241_g20345_i0 PRJNA533623 22098 493 86.428241 426.09122813 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 152 1.48e-41   NR XP_068368956.1 1144522 g20345 i0 76.8 0.918864097363083 151 32 91.3 2 19 468 23 171 XP_068368956.1 guanine nucleotide-binding protein beta subunit [Tritrichomonas foetus] diamond 453 152 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
22182794 22182794 PRJNA533623_P_NODE_2218_length_1411_cov_43.439259_g1470_i0 PRJNA533623 2218 1411 43.439259 612.92794449 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 636 6.749999999999998e-226   NR XP_068346503.1 1144522 g1470 i0 72.7 0.912119064493267 429 109 91.2 2 47 1333 1 421 XP_068346503.1 major facilitator superfamily transporter [Tritrichomonas foetus] diamond 1287 636 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
22183214 22183214 PRJNA533623_P_NODE_39178_length_349_cov_76.399306_g37404_i0 PRJNA533623 39178 349 76.399306 266.63357794 Tritrichomonas musculus 1915356 Parabasalia other_Eukaryota 216 2.19e-69   NR KAK8835243.1 1915356 g37404 i0 96.1 0.876790830945559 102 4 87.7 0 16 321 94 195 KAK8835243.1 Superoxide dismutase [Mn], mitochondrial [Tritrichomonas musculus] diamond 306 216 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas musculus
26617887 26617887 PRJNA533623_P_NODE_51261_length_288_cov_25.251101_g49482_i0 PRJNA533623 51261 288 25.251101 72.72317088 Tritrichomonadida 740972 Parabasalia other_Eukaryota 74.7 2.5e-13   NR XP_067778718.1 135588 g49482 i0 42 2.53125 81 47 84.4 0 252 10 1 81 XP_067778718.1 Ser/Thr protein phosphatase [Histomonas meleagridis] diamond 729 75.1 0.994673768308922 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27457181 27457181 PRJNA533623_P_NODE_33203_length_388_cov_22.639144_g31432_i0 PRJNA533623 33203 388 22.639144 87.83987872 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 49.7 2.27e-4   NR XP_068362327.1 1144522 g31432 i0 52.5 0.664948453608247 40 18 30.9 1 346 227 6 44 XP_068362327.1 uncharacterized protein TRFO_22021 [Tritrichomonas foetus] diamond 258 49.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27614995 27614995 PRJNA533623_P_NODE_12284_length_671_cov_70.472131_g10644_i0 PRJNA533623 12284 671 70.472131 472.86799901 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 60.5 1.4e-6   NR XP_068368777.1 1144522 g10644 i0 34.4 1.70789865871833 227 107 89.4 8 647 48 1113 1324 XP_068368777.1 uncharacterized protein TRFO_14012 [Tritrichomonas foetus] diamond 1146 60.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27710034 27710034 PRJNA533623_P_NODE_35924_length_369_cov_24.620130_g34152_i0 PRJNA533623 35924 369 24.62013 90.8482797 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 153 3.62e-45   NR XP_067772870.1 135588 g34152 i0 70.5 0.853658536585366 105 31 85.4 0 343 29 30 134 XP_067772870.1 ribosomal protein L32 [Histomonas meleagridis] diamond 315 153 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27710048 27710048 PRJNA533623_P_NODE_60064_length_253_cov_33.552083_g58284_i0 PRJNA533623 60064 253 33.552083 84.88676999 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 96.3 2.5e-24   NR XP_068348565.1 1144522 g58284 i0 90.2 0.604743083003953 51 5 60.5 0 215 63 1 51 XP_068348565.1 60S ribosomal protein L39 [Tritrichomonas foetus] diamond 153 96.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27772914 27772914 PRJNA533623_P_NODE_10164_length_734_cov_30.111441_g8603_i0 PRJNA533623 10164 734 30.111441 221.01797694 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 57 7.33e-6   NR XP_067769094.1 135588 g8603 i0 27.9 0.629427792915531 154 110 62.9 1 647 186 14 166 XP_067769094.1 charged multivesicular body protein 6-A [Histomonas meleagridis] diamond 462 57 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27835738 27835738 PRJNA533623_P_NODE_12984_length_653_cov_60.000000_g11324_i0 PRJNA533623 12984 653 60 391.8 Tritrichomonas musculus 1915356 Parabasalia other_Eukaryota 363 1.18e-125   NR KAK8835243.1 1915356 g11324 i0 87.7 0.895865237366003 195 24 89.6 0 34 618 1 195 KAK8835243.1 Superoxide dismutase [Mn], mitochondrial [Tritrichomonas musculus] diamond 585 363 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas musculus
28846079 28846079 PRJNA533623_P_NODE_77448_length_201_cov_11.457143_g75667_i0 PRJNA533623 77448 201 11.457143 23.02885743 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 67.4 9.62e-13   NR XP_068365450.1 1144522 g75667 i0 79.5 1.16417910447761 39 8 58.2 0 27 143 54 92 XP_068365450.1 60S ribosomal protein L27a [Tritrichomonas foetus] diamond 234 67.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29383062 29383062 PRJNA533623_P_NODE_23469_length_477_cov_39.622596_g21711_i0 PRJNA533623 23469 477 39.622596 188.99978292 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 251 7.41e-83   NR XP_068363703.1 1144522 g21711 i0 84.4 0.886792452830189 141 21 88.7 1 459 37 19 158 XP_068363703.1 ribosomal protein L21e [Tritrichomonas foetus] diamond 423 251 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29540771 29540771 PRJNA533623_P_NODE_7710_length_836_cov_33.643871_g6283_i0 PRJNA533623 7710 836 33.643871 281.26276156 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 338 6.72e-114   NR XP_067775188.1 135588 g6283 i0 65.6 0.864832535885168 241 83 86.5 0 752 30 9 249 XP_067775188.1 hsp70 nucleotide exchange factor FES1 [Histomonas meleagridis] diamond 723 338 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30299340 30299340 PRJNA533623_P_NODE_18412_length_546_cov_32.090722_g16675_i0 PRJNA533623 18412 546 32.090722 175.21534212 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 143 2.6899999999999993e-40   NR XP_067778773.1 135588 g16675 i0 52.8 0.78021978021978 142 66 77.5 1 34 456 1 142 XP_067778773.1 eukaryotic translation initiation factor 1A-like [Histomonas meleagridis] diamond 426 143 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31816119 31816119 PRJNA533623_P_NODE_35677_length_371_cov_7.064516_g33905_i0 PRJNA533623 35677 371 7.064516 26.20935436 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 82 2.42e-16   NR XP_068361881.1 1144522 g33905 i0 39.3 0.905660377358491 112 60 90.6 3 11 346 110 213 XP_068361881.1 Ras-related protein Rab-32 [Tritrichomonas foetus] diamond 336 82 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31957594 31957594 PRJNA533623_P_NODE_11197_length_702_cov_9.163807_g9598_i0 PRJNA533623 11197 702 9.163807 64.32992514 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.2 1.4e-12   NR XP_067776480.1 135588 g9598 i0 34.1 2.08974358974359 135 76 55.1 6 48 434 231 358 XP_067776480.1 Zinc finger in N-recognin family protein [Histomonas meleagridis] diamond 1467 78.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;