RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA533623" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA533623 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22182498 22182498 PRJNA533623_P_NODE_10758_length_715_cov_11.957187_g9178_i0 PRJNA533623 10758 715 11.957187 85.49388705 root 1 Root_unresolved Root_unresolved 167 4.83e-46   NR KAJ9465457.1 91374 g9178 i0 54.1 1.21678321678322 146 66 60.8 1 481 47 224 369 KAJ9465457.1 Mitochondrial cardiolipin hydrolase [Diplonema papillatum] diamond 870 167 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29445948 29445948 PRJNA533623_P_NODE_25690_length_454_cov_6.236641_g23922_i0 PRJNA533623 25690 454 6.236641 28.31435014 Bodo saltans 75058 Euglenozoa other_Eukaryota 49.7 0.00108   NR CUG92722.1 75058 g23922 i0 39 0.389867841409692 59 35 39 1 299 123 338 395 CUG92722.1 phosphoesterase, putative [Bodo saltans] diamond 177 49.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29856592 29856592 PRJNA533623_P_NODE_26411_length_447_cov_4.994819_g24642_i0 PRJNA533623 26411 447 4.994819 22.32684093 Bodo saltans 75058 Euglenozoa other_Eukaryota 209 7.220000000000001e-63   NR CUI15189.1 75058 g24642 i0 66.9 0.932885906040268 139 46 93.3 0 446 30 78 216 CUI15189.1 phosphoesterase-like protein, putative, partial [Bodo saltans] diamond 417 209 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30977536 30977536 PRJNA533623_P_NODE_18734_length_541_cov_14.743750_g16994_i0 PRJNA533623 18734 541 14.74375 79.7636875 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 72.4 2.92e-11   NR KAJ9462382.1 91374 g16994 i0 32 2.78373382624769 200 86 84.3 9 502 47 99 296 KAJ9462382.1 hypothetical protein DIPPA_06563 [Diplonema papillatum] diamond 1506 72.8 0.994505494505495 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;