RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA533623" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA533623 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28404243 28404243 PRJNA533623_P_NODE_70026_length_220_cov_1.408805_g68245_i0 PRJNA533623 70026 220 1.408805 3.099371 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 62.4 3.22e-9   NR MES1917203.1 1215613 g68245 i0 40.3 0.981818181818182 72 42 96.8 1 219 7 58 129 MES1917203.1 hypothetical protein [Cercozoa sp. M6MM] diamond 216 62.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30804458 30804458 PRJNA533623_P_NODE_37854_length_358_cov_2.457912_g36082_i0 PRJNA533623 37854 358 2.457912 8.79932496 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 68.9 5.38e-11   NR MES1909125.1 1215613 g36082 i0 40 1.25698324022346 75 45 62.8 0 133 357 157 231 MES1909125.1 hypothetical protein [Cercozoa sp. M6MM] diamond 450 68.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;