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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA533623" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 28 ✖

tax_kingdom 1

bioproject 1

  • PRJNA533623 · 28 ✖

analysis 1

  • diamond · 28 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19632563 19632563 PRJNA533623_P_NODE_38856_length_352_cov_0.821306_g37082_i0 PRJNA533623 38856 352 0.821306 2.89099712 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 147 2.14e-39   NR PZO87738.1 349221 g37082 i0 71.6 2.78693181818182 109 31 92.9 0 26 352 368 476 PZO87738.1 MAG: Na+/H+ antiporter, partial [Micavibrio aeruginosavorus] diamond 981 147 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
26744152 26744152 PRJNA533623_P_NODE_50821_length_290_cov_12.371179_g49042_i0 PRJNA533623 50821 290 12.371179 35.8764191 Pseudomonadati 3379134 Bacteria Bacteria 112 9.69e-28   NR WP_321398501.1 28202 g49042 i0 69.7 1.57241379310345 76 23 78.6 0 14 241 115 190 WP_321398501.1 hydroxymethylglutaryl-CoA lyase [Peredibacter starrii] diamond 456 113 0.991150442477876 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
26951019 26951019 PRJNA533623_P_NODE_16122_length_587_cov_7.041825_g14407_i0 PRJNA533623 16122 587 7.041825 41.33551275 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 85.5 8.33e-17   NR MBX3023165.1 2053517 g14407 i0 45.5 0.505962521294719 99 46 46.5 1 277 5 2 100 MBX3023165.1 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Bdellovibrionales bacterium] diamond 297 85.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27109198 27109198 PRJNA533623_P_NODE_41762_length_334_cov_31.923077_g39988_i0 PRJNA533623 41762 334 31.923077 106.62307718 Micavibrio sp. 2024841 Bacteria Bacteria 145 8.959999999999999e-38   NR MDB5492298.1 2024841 g39988 i0 58.1 0.94311377245509 105 44 94.3 0 325 11 364 468 MDB5492298.1 hypothetical protein [Micavibrio sp.] diamond 315 145 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
27393990 27393990 PRJNA533623_P_NODE_18943_length_538_cov_10.354298_g17202_i0 PRJNA533623 18943 538 10.354298 55.70612324 Silvanigrellaceae bacterium 2654442 Bacteria Bacteria 57.4 1.5e-6   NR MBX9703086.1 2654442 g17202 i0 45.9 0.340148698884758 61 33 34 0 447 265 4 64 MBX9703086.1 hypothetical protein [Silvanigrellaceae bacterium] diamond 183 57.4 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae   Silvanigrellaceae bacterium
27394013 27394013 PRJNA533623_P_NODE_7483_length_848_cov_26.768742_g6072_i0 PRJNA533623 7483 848 26.768742 226.99893216 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 95.9 4.67e-18   NR MCB0345917.1 2053517 g6072 i0 44.7 0.36438679245283 103 57 36.4 0 336 28 1085 1187 MCB0345917.1 glycosyltransferase [Bdellovibrionales bacterium] diamond 309 95.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27646629 27646629 PRJNA533623_P_NODE_31004_length_406_cov_5.733333_g29233_i0 PRJNA533623 31004 406 5.733333 23.27733198 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 74.7 1.47e-12   NR MBK7891192.1 2053517 g29233 i0 50 0.54679802955665 74 35 53.2 1 170 385 385 458 MBK7891192.1 AAA family ATPase [Bdellovibrionales bacterium] diamond 222 74.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27898841 27898841 PRJNA533623_P_NODE_35665_length_371_cov_9.119355_g33893_i0 PRJNA533623 35665 371 9.119355 33.83280705 Bdellovibrio sp. 28201 Bacteria Bacteria 132 4.27e-33   NR PWU18869.1 28201 g33893 i0 65.5 0.703504043126685 87 30 70.4 0 106 366 17 103 PWU18869.1 MAG: copper-translocating P-type ATPase [Bdellovibrio sp.] diamond 261 132 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
27945585 27945585 PRJNA533623_P_NODE_5365_length_985_cov_16.599567_g4131_i0 PRJNA533623 5365 985 16.599567 163.50573495 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 334 4.539999999999999e-110   NR MBX3020409.1 2053517 g4131 i0 74.4 1.47715736040609 242 62 73.7 0 965 240 110 351 MBX3020409.1 AI-2E family transporter [Bdellovibrionales bacterium] diamond 1455 334 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27977062 27977062 PRJNA533623_P_NODE_54925_length_273_cov_10.169811_g53146_i0 PRJNA533623 54925 273 10.169811 27.76358403 Pseudomonadati 3379134 Bacteria Bacteria 103 2.93e-23   NR HLW56394.1 2081706 g53146 i0 79.4 2.07692307692308 63 13 69.2 0 4 192 500 562 HLW56394.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG [Bacteriovoracaceae bacterium] diamond 567 103 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
28214563 28214563 PRJNA533623_P_NODE_80526_length_178_cov_18.675214_g78745_i0 PRJNA533623 80526 178 18.675214 33.24188092 Oligoflexus sp. 1971216 Bacteria Bacteria 79 2.6e-15   NR MBC7530536.1 1971216 g78745 i0 90.2 2.07303370786517 41 4 69.1 0 125 3 747 787 MBC7530536.1 DEAD/DEAH box helicase [Oligoflexus sp.] diamond 369 79 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
28640363 28640363 PRJNA533623_P_NODE_17627_length_559_cov_5.684739_g15896_i0 PRJNA533623 17627 559 5.684739 31.77769101 Bdellovibrionota 3018035 Bacteria Bacteria 268 1.1699999999999999e-81   NR MBX2995370.1 2026715 g15896 i0 77.9 7.4221824686941 172 38 92.3 0 539 24 401 572 MBX2995370.1 TraC family protein [Pseudobdellovibrionaceae bacterium] diamond 4149 268 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
28671880 28671880 PRJNA533623_P_NODE_41467_length_336_cov_5.847273_g39693_i0 PRJNA533623 41467 336 5.847273 19.64683728 Bdellovibrio 958 Bacteria Bacteria 69.7 2.18e-13   NR MBO9667969.1 28201 g39693 i0 91.9 2.61607142857143 37 3 33 0 131 21 1 37 MBO9667969.1 30S ribosomal protein S10 [Bdellovibrio sp.] diamond 879 69.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
28909110 28909110 PRJNA533623_P_NODE_7988_length_824_cov_7.061599_g6549_i0 PRJNA533623 7988 824 7.061599 58.18757576 Bdellovibrio sp. ArHS 1569284 Bacteria Bacteria 335 8.98e-111   NR WP_041872784.1 1569284 g6549 i0 95.9 0.615291262135922 169 7 61.5 0 620 114 1 169 WP_041872784.1 hypothetical protein [Bdellovibrio sp. ArHS] diamond 507 335 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. ArHS
29035909 29035909 PRJNA533623_P_NODE_6568_length_901_cov_7.371429_g5230_i0 PRJNA533623 6568 901 7.371429 66.41657529 Bdellovibrio sp. ArHS 1569284 Bacteria Bacteria 442 5.0999999999999984e-154   NR WP_041869738.1 1569284 g5230 i0 99.5 0.719200887902331 216 1 71.9 0 235 882 1 216 WP_041869738.1 hypothetical protein [Bdellovibrio sp. ArHS] diamond 648 442 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. ArHS
29477401 29477401 PRJNA533623_P_NODE_10730_length_716_cov_11.071756_g9151_i0 PRJNA533623 10730 716 11.071756 79.27377296 Bacteriovoracales bacterium 2497611 Bacteria Bacteria 60.8 3.21e-7   NR MFI5391234.1 2497611 g9151 i0 29.6 0.636871508379888 152 102 63.3 4 532 80 34 181 MFI5391234.1 START domain-containing protein [Bacteriovoracales bacterium] diamond 456 60.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales     Bacteriovoracales bacterium
29603675 29603675 PRJNA533623_P_NODE_71610_length_215_cov_2.110390_g69829_i0 PRJNA533623 71610 215 2.11039 4.5373385 Bdellovibrio sp. ArHS 1569284 Bacteria Bacteria 137 4.26e-37   NR WP_041869422.1 1569284 g69829 i0 100 0.893023255813953 64 0 89.3 0 3 194 274 337 WP_041869422.1 hypothetical protein [Bdellovibrio sp. ArHS] diamond 192 137 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. ArHS
29730073 29730073 PRJNA533623_P_NODE_45090_length_317_cov_41.007812_g43316_i0 PRJNA533623 45090 317 41.007812 129.99476404 Bdellovibrio sp. HCB274 3394361 Bacteria Bacteria 196 1.03e-61   NR WP_413587257.1 3394361 g43316 i0 84.8 0.936908517350158 99 15 93.7 0 298 2 73 171 WP_413587257.1 NAD(P)H-dependent oxidoreductase [Bdellovibrio sp. HCB274] diamond 297 196 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB274
29856606 29856606 PRJNA533623_P_NODE_47111_length_307_cov_17.089431_g45333_i0 PRJNA533623 47111 307 17.089431 52.46455317 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 122 1.6199999999999998e-32   NR PZO86485.1 349221 g45333 i0 92.3 0.635179153094462 65 5 63.5 0 299 105 139 203 PZO86485.1 MAG: hypothetical protein DI626_06485 [Micavibrio aeruginosavorus] diamond 195 122 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
30709585 30709585 PRJNA533623_P_NODE_42314_length_332_cov_0.959410_g40540_i0 PRJNA533623 42314 332 0.95941 3.1852412 Micavibrio sp. 2024841 Bacteria Bacteria 176 3.7e-52   NR HEY8190632.1 2024841 g40540 i0 79 1.92469879518072 105 22 94.9 0 11 325 124 228 HEY8190632.1 DotH/IcmK family type IV secretion protein [Micavibrio sp.] diamond 639 176 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
30741227 30741227 PRJNA533623_P_NODE_32434_length_394_cov_18.318318_g30663_i0 PRJNA533623 32434 394 18.318318 72.17417292 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 74.7 7.22e-13   NR MEK7357430.1 3034175 g30663 i0 55 1.88832487309645 60 27 45.7 0 230 51 7 66 MEK7357430.1 hypothetical protein [Bdellovibrionota bacterium] diamond 744 74.7 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30741251 30741251 PRJNA533623_P_NODE_72874_length_211_cov_2.393333_g71093_i0 PRJNA533623 72874 211 2.393333 5.04993263 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 80.5 1.45e-16   NR PZP55389.1 349221 g71093 i0 60.3 0.895734597156398 63 25 89.6 0 206 18 50 112 PZP55389.1 MAG: leucyl/phenylalanyl-tRNA--protein transferase [Micavibrio aeruginosavorus] diamond 189 80.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
30994104 30994104 PRJNA533623_P_NODE_38294_length_355_cov_5.088435_g36522_i0 PRJNA533623 38294 355 5.088435 18.06394425 Oligoflexales bacterium 2687297 Bacteria Bacteria 48.5 0.00121   NR NRA47297.1 2687297 g36522 i0 43.4 0.447887323943662 53 25 44.8 1 58 216 120 167 NRA47297.1 hypothetical protein [Oligoflexales bacterium] diamond 159 48.5 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales     Oligoflexales bacterium
31689554 31689554 PRJNA533623_P_NODE_14477_length_619_cov_9.718638_g12785_i0 PRJNA533623 14477 619 9.718638 60.15836922 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 180 4.99e-51   NR HMN69299.1 2053517 g12785 i0 75.9 0.54281098546042 112 27 54.3 0 270 605 112 223 HMN69299.1 glycosyltransferase family 4 protein [Bdellovibrionales bacterium] diamond 336 180 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32069217 32069217 PRJNA533623_P_NODE_47118_length_307_cov_13.796748_g45340_i0 PRJNA533623 47118 307 13.796748 42.35601636 Pseudobdellovibrio sp. 2862747 Bacteria Bacteria 125 2.04e-31   NR MEQ1722331.1 2862747 g45340 i0 59.6 0.9185667752443 94 38 91.9 0 2 283 38 131 MEQ1722331.1 GGDEF domain-containing protein [Pseudobdellovibrio sp.] diamond 282 125 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio sp.
32385699 32385699 PRJNA533623_P_NODE_26499_length_446_cov_7.924675_g24730_i0 PRJNA533623 26499 446 7.924675 35.3440505 Bdellovibrionales bacterium GWB1_52_6 1797385 Bacteria Bacteria 79.7 5.84e-15   NR OFY98834.1 1797385 g24730 i0 79.5 0.295964125560538 44 9 29.6 0 337 206 20 63 OFY98834.1 MAG: quercetin 2,3-dioxygenase [Bdellovibrionales bacterium GWB1_52_6] diamond 132 79.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium GWB1_52_6
32575737 32575737 PRJNA533623_P_NODE_80079_length_184_cov_7.926829_g78298_i0 PRJNA533623 80079 184 7.926829 14.58536536 Micavibrio sp. 2024841 Bacteria Bacteria 83.6 2.37e-17   NR TVQ82351.1 2024841 g78298 i0 65 0.978260869565217 60 21 97.8 0 180 1 180 239 TVQ82351.1 MAG: restriction endonuclease [Micavibrio sp.] diamond 180 83.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
32701323 32701323 PRJNA533623_P_NODE_46500_length_310_cov_14.618474_g44722_i0 PRJNA533623 46500 310 14.618474 45.3172694 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 80.9 2.57e-15   NR MES2802333.1 3034175 g44722 i0 60.3 0.561290322580645 58 23 56.1 0 130 303 10 67 MES2802333.1 TRAM domain-containing protein [Bdellovibrionota bacterium] diamond 174 80.9 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;