RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA533623" and tax_clade = "core chlorophytes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 28 ✖

bioproject 1

  • PRJNA533623 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1117685 1117685 PRJNA533623_P_NODE_27781_length_433_cov_37.750000_g26011_i0 PRJNA533623 27781 433 37.75 163.4575 Micractinium sp. CCAP 211/92 554058 Plants Plants 146 2.3299999999999993e-42   NR KAL4437790.1 554058 g26011 i0 72.6 1.33025404157044 95 25 65.1 1 86 367 11 105 KAL4437790.1 hypothetical protein ABPG77_005702 [Micractinium sp. CCAP 211/92] diamond 576 146 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92
8158876 8158876 PRJNA533623_P_NODE_20307_length_518_cov_8.256018_g18560_i0 PRJNA533623 20307 518 8.256018 42.76617324 root 1 Root_unresolved Root_unresolved 77.8 4.1e-13   NR QGN03527.1 31302 g18560 i0 38.1 11.8030888030888 139 64 74.7 3 22 408 620 746 QGN03527.1 acetyl-CoA synthetase [Chromochloris zofingiensis] diamond 6114 77.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Chromochloridaceae Chromochloris Chromochloris zofingiensis
19633509 19633509 PRJNA533623_P_NODE_9996_length_740_cov_105.030928_g8440_i0 PRJNA533623 9996 740 105.030928 777.2288672 Eukaryota 2759 Plants Plants 207 9.99e-60   NR CAA87753.1 3161 g8440 i0 61 10.7716216216216 159 60 64.5 2 738 262 355 511 CAA87753.1 Cytochrome oxidase subunit I [Tetraselmis subcordiformis] diamond 7971 208 0.995192307692308 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Tetraselmis Tetraselmis subcordiformis
22182568 22182568 PRJNA533623_P_NODE_1318_length_1739_cov_6.143623_g813_i0 PRJNA533623 1318 1739 6.143623 106.83760397 Chlorophyta 3041 Plants Plants 218 1.1299999999999998e-56   NR PRW56740.1 3076 g813 i0 48 6.34847613571018 225 109 38.6 3 1383 712 163 380 PRW56740.1 chromatin-remodeling complex ATPase chain [Chlorella sorokiniana] diamond 11040 219 0.995433789954338 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
24731708 24731708 PRJNA533623_P_NODE_10460_length_725_cov_17.825301_g8889_i0 PRJNA533623 10460 725 17.825301 129.23343225 Viridiplantae 33090 Plants Plants 106 2.89e-22   NR KAG2435731.1 51695 g8889 i0 37.5 6.17379310344828 200 95 71.2 4 201 716 39 236 KAG2435731.1 hypothetical protein HXX76_006928 [Chlamydomonas incerta] diamond 4476 106 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
27014406 27014406 PRJNA533623_P_NODE_19362_length_532_cov_5.853503_g17621_i0 PRJNA533623 19362 532 5.853503 31.14063596 Coccomyxa elongata 1965095 Plants Plants 52.8 1.77e-4   NR CAL8461961.1 1965095 g17621 i0 36.6 0.400375939849624 71 41 37.8 2 61 261 267 337 CAL8461961.1 g1492 [Coccomyxa elongata] diamond 213 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
27425665 27425665 PRJNA533623_P_NODE_58123_length_261_cov_2.190000_g56343_i0 PRJNA533623 58123 261 2.19 5.7159 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 73.6 6.68e-13   NR KAL4524630.1 1650286 g56343 i0 43.3 2.06896551724138 90 48 100 2 261 1 423 512 KAL4524630.1 hypothetical protein Ndes2526A_g06746 [Chlorella desiccata (nom. nud.)] diamond 540 73.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
27804464 27804464 PRJNA533623_P_NODE_40584_length_341_cov_7.700000_g38810_i0 PRJNA533623 40584 341 7.7 26.257 [Myrmecia] bisecta 41462 Plants Plants 56.2 1.78e-6   NR KAK9815782.1 41462 g38810 i0 36.1 0.853372434017595 97 58 82.7 3 24 305 129 224 KAK9815782.1 hypothetical protein WJX72_009387 [[Myrmecia] bisecta] diamond 291 56.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
28246125 28246125 PRJNA533623_P_NODE_47906_length_304_cov_1.440329_g46127_i0 PRJNA533623 47906 304 1.440329 4.37860016 Ostreobium quekettii 121088 Plants Plants 58.9 1.53e-7   NR CAD7696775.1 121088 g46127 i0 36.8 1.60855263157895 76 47 74 1 78 302 20 95 CAD7696775.1 unnamed protein product [Ostreobium quekettii] diamond 489 58.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
28309565 28309565 PRJNA533623_P_NODE_8466_length_802_cov_12.647773_g7000_i0 PRJNA533623 8466 802 12.647773 101.43513946 Trebouxia sp. C 2796353 Plants Plants 71.6 4.38e-10   NR KAL3154080.1 3373145 g7000 i0 28 0.628428927680798 168 98 59.1 3 802 329 298 452 KAL3154080.1 hypothetical protein ABBQ32_013618 [Trebouxia sp. C0010 RCD-2024] diamond 504 71.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
28387516 28387516 PRJNA533623_P_NODE_10666_length_718_cov_11.630137_g9089_i0 PRJNA533623 10666 718 11.630137 83.50438366 Chlamydomonadales 3042 Plants Plants 129 5.07e-31   NR KXZ51749.1 33097 g9089 i0 67 0.823119777158774 100 33 41.8 0 384 683 343 442 KXZ51749.1 hypothetical protein GPECTOR_11g195 [Gonium pectorale] diamond 591 129 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
29351546 29351546 PRJNA533623_P_NODE_74469_length_208_cov_0.884354_g72688_i0 PRJNA533623 74469 208 0.884354 1.83945632 Ankistrodesmus falcatus 52960 Plants Plants 116 1.31e-28   NR YP_009944748.1 52960 g72688 i0 78.3 0.995192307692308 69 15 99.5 0 207 1 75 143 YP_009944748.1 NADH-ubiquinone oxidoreductase subunit 4 [Ankistrodesmus falcatus] diamond 207 116 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Ankistrodesmus Ankistrodesmus falcatus
29397941 29397941 PRJNA533623_P_NODE_15809_length_593_cov_11.644737_g14098_i0 PRJNA533623 15809 593 11.644737 69.05329041 Eukaryota 2759 Plants Plants 103 8.53e-22   NR WIA11769.1 3088 g14098 i0 74.6 35.1703204047218 63 16 31.9 0 397 585 250 312 WIA11769.1 hypothetical protein OEZ85_011863 [Tetradesmus obliquus] diamond 20856 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29618586 29618586 PRJNA533623_P_NODE_17210_length_566_cov_6.940594_g15484_i0 PRJNA533623 17210 566 6.940594 39.28376204 Eukaryota 2759 Plants Plants 89.4 3.55e-17   NR WIA20526.1 3088 g15484 i0 65.7 1.0547703180212 67 23 35.5 0 218 18 325 391 WIA20526.1 hypothetical protein OEZ85_004921 [Tetradesmus obliquus] diamond 597 89.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
30140550 30140550 PRJNA533623_P_NODE_32732_length_392_cov_9.359517_g30961_i0 PRJNA533623 32732 392 9.359517 36.68930664 Chlorella vulgaris 3077 Plants Plants 60.8 1.47e-8   NR KAL4857366.1 3077 g30961 i0 54.5 0.673469387755102 44 20 33.7 0 171 302 110 153 KAL4857366.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Chlorella vulgaris] diamond 264 60.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
30299341 30299341 PRJNA533623_P_NODE_21512_length_501_cov_6.293182_g19763_i0 PRJNA533623 21512 501 6.293182 31.52884182 Ostreobium quekettii 121088 Plants Plants 61.6 1.45e-7   NR CAD7699242.1 121088 g19763 i0 72.2 2.10179640718563 36 10 21.6 0 293 400 1019 1054 CAD7699242.1 unnamed protein product [Ostreobium quekettii] diamond 1053 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
30346006 30346006 PRJNA533623_P_NODE_5112_length_1005_cov_14.097458_g3901_i0 PRJNA533623 5112 1005 14.097458 141.6794529 Chlorophyta 3041 Plants Plants 65.1 1.58e-7   NR CAG9463992.1 765719 g3901 i0 57.8 0.522388059701492 45 19 13.4 0 989 855 113 157 CAG9463992.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 525 65.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
31088794 31088794 PRJNA533623_P_NODE_2415_length_1360_cov_16.418784_g1622_i0 PRJNA533623 2415 1360 16.418784 223.2954624 Bryopsis sp. KO-2 3115439 Plants Plants 305 5.419999999999998e-88   NR GMH42151.1 3041901 g1622 i0 46.2 1.53088235294118 346 179 75.9 4 1057 26 8068 8408 GMH42151.1 hypothetical protein BSKO_10070 [Bryopsis sp. KO-2023] diamond 2082 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
31120085 31120085 PRJNA533623_P_NODE_28295_length_429_cov_3.383152_g26525_i0 PRJNA533623 28295 429 3.383152 14.51372208 Chlorella sorokiniana 3076 Plants Plants 92 4.6e-19   NR PRW58505.1 3076 g26525 i0 49.5 0.65034965034965 93 45 63.6 1 404 132 206 298 PRW58505.1 n a [Chlorella sorokiniana] diamond 279 92 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31419885 31419885 PRJNA533623_P_NODE_80736_length_176_cov_4.469565_g78955_i0 PRJNA533623 80736 176 4.469565 7.8664344 Chlorophyta 3041 Plants Plants 68.6 1.18e-11   NR KAI3433814.1 3077 g78955 i0 66.7 2.40340909090909 48 16 81.8 0 155 12 559 606 KAI3433814.1 hypothetical protein D9Q98_003618 [Chlorella vulgaris] diamond 423 68.9 0.995645863570392 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
31500029 31500029 PRJNA533623_P_NODE_19936_length_523_cov_11.757576_g18191_i0 PRJNA533623 19936 523 11.757576 61.49212248 Prototheca wickerhamii 3111 Plants Plants 167 8.48e-50   NR KAK2075613.1 3111 g18191 i0 64.7 3.18929254302103 133 47 76.3 0 83 481 8 140 KAK2075613.1 60S ribosomal protein L26A [Prototheca wickerhamii] diamond 1668 167 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
31515104 31515104 PRJNA533623_P_NODE_63276_length_242_cov_2.751381_g61495_i0 PRJNA533623 63276 242 2.751381 6.65834202 Eukaryota 2759 Plants Plants 83.6 1.1e-16   NR KAF5826810.1 3046 g61495 i0 79.2 7.73553719008264 48 10 59.5 0 19 162 286 333 KAF5826810.1 lung seven transmembrane receptor-domain-containing protein [Dunaliella salina] diamond 1872 84 0.995238095238095 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31799314 31799314 PRJNA533623_P_NODE_1537_length_1634_cov_18.776224_g968_i0 PRJNA533623 1537 1634 18.776224 306.80350016 Trebouxia 13786 Plants Plants 130 1.99e-28   NR KAL0020580.1 2905653 g968 i0 38.9 1.6468788249694 175 101 31.8 3 3 521 344 514 KAL0020580.1 hypothetical protein WJX77_005469 [Trebouxia sp. C0004] diamond 2691 130 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
31862568 31862568 PRJNA533623_P_NODE_42977_length_328_cov_5.842697_g41203_i0 PRJNA533623 42977 328 5.842697 19.16404616 Trebouxia 13786 Plants Plants 48.9 5.78e-4   NR KAA6426169.1 2608996 g41203 i0 28.6 1.91158536585366 70 49 64 1 233 24 5 73 KAA6426169.1 MAG: RNA-binding RBP37 [Trebouxia sp. A1-2] diamond 627 48.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
32006066 32006066 PRJNA533623_P_NODE_76478_length_204_cov_0.909091_g74697_i0 PRJNA533623 76478 204 0.909091 1.85454564 Raphidocelis subcapitata 307507 Plants Plants 59.7 2.33e-8   NR GBF91626.1 307507 g74697 i0 61.9 0.926470588235294 63 21 88.2 1 188 9 361 423 GBF91626.1 hypothetical protein Rsub_04366 [Raphidocelis subcapitata] diamond 189 59.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
32195896 32195896 PRJNA533623_P_NODE_6798_length_886_cov_32.236364_g5447_i0 PRJNA533623 6798 886 32.236364 285.61418504 Coccomyxa viridis 1274662 Plants Plants 142 3.54e-34   NR CAK0785781.1 1274662 g5447 i0 54.6 0.954853273137698 141 61 47.1 2 553 137 524 663 CAK0785781.1 hypothetical protein CVIRNUC_008992 [Coccomyxa viridis] diamond 846 142 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
32210869 32210869 PRJNA533623_P_NODE_2438_length_1355_cov_23.761206_g1637_i0 PRJNA533623 2438 1355 23.761206 321.9643413 Trebouxia 13786 Plants Plants 327 1.31e-102   NR KAL0038476.1 2905653 g1637 i0 48.4 4.16014760147602 376 176 81.5 8 59 1162 150 515 KAL0038476.1 hypothetical protein WJX77_007631 [Trebouxia sp. C0004] diamond 5637 328 0.996951219512195 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
32621843 32621843 PRJNA533623_P_NODE_75280_length_206_cov_1.793103_g73499_i0 PRJNA533623 75280 206 1.793103 3.69379218 Eukaryota 2759 Plants Plants 49.7 8.17e-5   NR XP_011399994.1 3075 g73499 i0 52.9 1.73300970873786 51 21 74.3 2 39 191 344 391 XP_011399994.1 hypothetical protein F751_5870 [Auxenochlorella protothecoides] diamond 357 50.1 0.992015968063872 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;