RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA533114" and tax_phylum = "Candidatus Muiribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Muiribacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA533114 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29951352 29951352 PRJNA533114_P_NODE_6851_length_850_cov_2.160875_g6656_i0 PRJNA533114 6851 850 2.160875 18.3674375 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 60.1 6.71e-8   NR PLX17189.1 2053465 g6656 i0 47.1 0.72 70 32 24.7 1 838 629 7 71 PLX17189.1 MAG: 30S ribosomal protein S18 [Candidatus Muiribacterium halophilum] diamond 612 60.1 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum
32417417 32417417 PRJNA533114_P_NODE_98779_length_249_cov_0.875000_g98527_i0 PRJNA533114 98779 249 0.875 2.17875 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 56.2 2.37e-7   NR MCK9225926.1 2053465 g98527 i0 36.5 0.891566265060241 74 47 89.2 0 25 246 25 98 MCK9225926.1 tetratricopeptide repeat protein [Candidatus Muiribacterium halophilum] diamond 222 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;