RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA532380" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA532380 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27203813 27203813 PRJNA532380_P_NODE_31762_length_164_cov_0.904348_g31437_i0 PRJNA532380 31762 164 0.904348 1.48313072 Phakopsora pachyrhizi 170000 Fungi Fungi 67 3.17e-12   NR KAI8455471.1 170000 g31437 i0 66 0.914634146341463 50 17 91.5 0 153 4 8 57 KAI8455471.1 dUTP diphosphatase [Phakopsora pachyrhizi] diamond 150 67 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Phakopsoraceae Phakopsora Phakopsora pachyrhizi
29193571 29193571 PRJNA532380_P_NODE_22329_length_190_cov_1.106383_g22004_i0 PRJNA532380 22329 190 1.106383 2.1021277 Serendipita vermifera MAFF 3 109899 Fungi Fungi 43.5 0.00274   NR KIM29253.1 933852 g22004 i0 52.3 1.68947368421053 44 20 67.9 1 129 1 23 66 KIM29253.1 hypothetical protein M408DRAFT_328926 [Serendipita vermifera MAFF 305830] diamond 321 43.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Sebacinales Serendipitaceae Serendipita Serendipita vermifera
30962340 30962340 PRJNA532380_P_NODE_31454_length_164_cov_0.904348_g31129_i0 PRJNA532380 31454 164 0.904348 1.48313072 Irpex lacteus 5319 Fungi Fungi 103 1.9e-26   NR KAI0763138.1 5319 g31129 i0 98.1 1.97560975609756 54 1 98.8 0 162 1 92 145 KAI0763138.1 hypothetical protein BC629DRAFT_1443291 [Irpex lacteus] diamond 324 103 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Irpicaceae Irpex Irpex lacteus
31341557 31341557 PRJNA532380_P_NODE_20376_length_199_cov_1.386667_g20051_i0 PRJNA532380 20376 199 1.386667 2.75946733 Pisolithus orientalis 936130 Fungi Fungi 75.9 4.45e-14   NR XP_051594294.1 936130 g20051 i0 48.4 17.7437185929648 62 32 93.5 0 199 14 459 520 XP_051594294.1 adaptin N terminal region-domain-containing protein [Pisolithus orientalis] diamond 3531 75.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Pisolithaceae Pisolithus Pisolithus orientalis
31468251 31468251 PRJNA532380_P_NODE_16876_length_219_cov_1.223529_g16551_i0 PRJNA532380 16876 219 1.223529 2.67952851 Schizopora paradoxa 27342 Fungi Fungi 87 4.84e-19   NR KLO20096.1 27342 g16551 i0 51.4 1.98630136986301 72 34 98.6 1 216 1 62 132 KLO20096.1 E2 ubiquitin-conjugating enzyme [Schizopora paradoxa] diamond 435 87 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Schizoporaceae Schizopora Schizopora paradoxa
31767750 31767750 PRJNA532380_P_NODE_30277_length_166_cov_0.888889_g29952_i0 PRJNA532380 30277 166 0.888889 1.47555574 Opisthokonta 33154 Fungi Fungi 102 1.1799999999999999e-23   NR KAK0531972.1 155126 g29952 i0 85.2 168 54 8 97.6 0 163 2 175 228 KAK0531972.1 26S proteasome regulatory subunit 7 [Tilletia horrida] diamond 27888 102 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Tilletiales Tilletiaceae Tilletia Tilletia horrida
32291002 32291002 PRJNA532380_P_NODE_32679_length_163_cov_0.912281_g32354_i0 PRJNA532380 32679 163 0.912281 1.48701803 Ceratobasidium theobromae 1582974 Fungi Fungi 41.2 0.0454   NR KAB5588459.1 1582974 g32354 i0 48.8 0.791411042944785 43 22 79.1 0 150 22 308 350 KAB5588459.1 hypothetical protein CTheo_8100 [Ceratobasidium theobromae] diamond 129 41.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Ceratobasidium Ceratobasidium theobromae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;