RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA529924" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA529924 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27203806 27203806 PRJNA529924_P_NODE_782_length_692_cov_2.374057_g647_i0 PRJNA529924 782 692 2.374057 16.42847444 Vittaforma corneae ATCC 5 42399 Fungi Fungi 306 1.1999999999999999e-100   NR XP_007603882.1 993615 g647 i0 80.5 0.732658959537572 169 33 73.3 0 2 508 107 275 XP_007603882.1 uncharacterized protein VICG_00429 [Vittaforma corneae ATCC 50505] diamond 507 306 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
30330842 30330842 PRJNA529924_P_NODE_2832_length_264_cov_1.872340_g2658_i0 PRJNA529924 2832 264 1.87234 4.9429776 Vittaforma corneae ATCC 5 42399 Fungi Fungi 69.3 1.59e-11   NR XP_007604125.1 993615 g2658 i0 41.9 0.977272727272727 86 50 97.7 0 7 264 244 329 XP_007604125.1 uncharacterized protein VICG_00674 [Vittaforma corneae ATCC 50505] diamond 258 69.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
31784217 31784217 PRJNA529924_P_NODE_2657_length_281_cov_1.841270_g2483_i0 PRJNA529924 2657 281 1.84127 5.1739687 Vittaforma corneae ATCC 5 42399 Fungi Fungi 130 1.32e-34   NR XP_007605002.1 993615 g2483 i0 74.2 0.99288256227758 93 24 99.3 0 3 281 212 304 XP_007605002.1 uncharacterized protein VICG_01556 [Vittaforma corneae ATCC 50505] diamond 279 130 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;