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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA529241" and tax_phylum = "candidate division WWE3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WWE3 · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA529241 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27456826 27456826 PRJNA529241_P_NODE_102323_length_216_cov_1.743017_g100001_i0 PRJNA529241 102323 216 1.743017 3.76491672 candidate division WWE3 bacterium 2053526 Bacteria Bacteria 42 0.0494   NR HAZ29210.1 2053526 g100001 i0 36.5 0.722222222222222 52 32 72.2 1 163 8 665 715 HAZ29210.1 hypothetical protein [candidate division WWE3 bacterium] diamond 156 42 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium
31404777 31404777 PRJNA529241_P_NODE_138156_length_192_cov_1.006452_g135834_i0 PRJNA529241 138156 192 1.006452 1.93238784 candidate division WWE3 bacterium CG 422282 Bacteria Bacteria 42 0.0313   NR PIS12445.1 1975089 g135834 i0 43.1 0.796875 51 26 75 1 166 23 107 157 PIS12445.1 MAG: hypothetical protein COT70_00850 [candidate division WWE3 bacterium CG09_land_8_20_14_0_10_47_33] diamond 153 42 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium CG09_land_8_20_14_0_10_47_33

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;