RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA529241" and tax_phylum = "Candidatus Muiribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Muiribacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA529241 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26950698 26950698 PRJNA529241_P_NODE_11782_length_752_cov_8.467133_g7327_i1 PRJNA529241 11782 752 8.467133 63.67284016 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 148 1.38e-37   NR MCK9477005.1 2053465 g7327 i1 53.5 1.13297872340426 142 64 55.9 2 751 332 277 418 MCK9477005.1 hypothetical protein [Candidatus Muiribacterium halophilum] diamond 852 148 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum
27393704 27393704 PRJNA529241_P_NODE_420763_length_167_cov_7.369231_g418441_i0 PRJNA529241 420763 167 7.369231 12.30661577 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 63.9 4.36e-10   NR MCK9476348.1 2053465 g418441 i0 81.3 1.13173652694611 32 6 57.5 0 167 72 303 334 MCK9476348.1 transposase [Candidatus Muiribacterium halophilum] diamond 189 63.9 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum
31531438 31531438 PRJNA529241_P_NODE_49456_length_290_cov_7.442688_g47134_i0 PRJNA529241 49456 290 7.442688 21.5837952 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 85.1 8.56e-17   NR MCK9476321.1 2053465 g47134 i0 60.3 0.703448275862069 68 27 70.3 0 289 86 423 490 MCK9476321.1 LamG domain-containing protein [Candidatus Muiribacterium halophilum] diamond 204 85.1 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;