RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA529241" and tax_phylum = "Candidatus Eiseniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Eiseniibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA529241 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26617818 26617818 PRJNA529241_P_NODE_352641_length_173_cov_2.838235_g350319_i0 PRJNA529241 352641 173 2.838235 4.91014655 Pseudomonadati 3379134 Bacteria Bacteria 52.4 5.7e-6   NR MEK7314970.1 2212470 g350319 i0 87.5 4.30057803468208 24 3 41.6 0 171 100 317 340 MEK7314970.1 lanthionine synthetase C family protein [Candidatus Eiseniibacteriota bacterium] diamond 744 52.8 0.992424242424242 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
28056531 28056531 PRJNA529241_P_NODE_460705_length_153_cov_3.439655_g458383_i0 PRJNA529241 460705 153 3.439655 5.26267215 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 48.1 1.39e-4   NR MBK8229174.1 2212470 g458383 i0 84 0.980392156862745 25 4 49 0 4 78 268 292 MBK8229174.1 MATE family efflux transporter [Candidatus Eiseniibacteriota bacterium] diamond 150 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;