RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA529241" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA529241 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27362301 27362301 PRJNA529241_P_NODE_74203_length_246_cov_6.861244_g71881_i0 PRJNA529241 74203 246 6.861244 16.87866024 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 49.7 1.47e-5   NR MCK9558796.1 2030808 g71881 i0 44.3 0.74390243902439 61 17 53.7 1 135 4 28 88 MCK9558796.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 183 49.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27582920 27582920 PRJNA529241_P_NODE_350404_length_173_cov_2.860294_g348082_i0 PRJNA529241 350404 173 2.860294 4.94830862 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 42.7 0.0048   NR MCF7859808.1 2030808 g348082 i0 60.9 0.398843930635838 23 9 39.9 0 1 69 18 40 MCF7859808.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 69 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
29587018 29587018 PRJNA529241_P_NODE_425610_length_166_cov_1.209302_g423288_i0 PRJNA529241 425610 166 1.209302 2.00744132 Pseudomonadati 3379134 Bacteria Bacteria 46.6 5.76e-4   NR MBC8312797.1 2030808 g423288 i0 33.3 4.78915662650602 54 36 97.6 0 1 162 234 287 MBC8312797.1 efflux RND transporter periplasmic adaptor subunit [Candidatus Cloacimonadota bacterium] diamond 795 46.6 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30235494 30235494 PRJNA529241_P_NODE_66592_length_257_cov_7.072727_g64270_i0 PRJNA529241 66592 257 7.072727 18.17690839 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 50.1 1.15e-5   NR MCK9558796.1 2030808 g64270 i0 84 0.291828793774319 25 4 29.2 0 76 2 45 69 MCK9558796.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 75 50.1 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;