RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA529241" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA529241 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19628381 19628381 PRJNA529241_P_NODE_68196_length_255_cov_3.486239_g65874_i0 PRJNA529241 68196 255 3.486239 8.88990945 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 104 3.36e-24   NR HSR58777.1 2785449 g65874 i0 45.1 3.6 153 16 100 1 255 1 117 269 HSR58777.1 IS3 family transposase [Candidatus Binataceae bacterium] diamond 918 104 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
27108959 27108959 PRJNA529241_P_NODE_542842_length_151_cov_3.131579_g540520_i0 PRJNA529241 542842 151 3.131579 4.72868429 Candidatus Binatus sp. 2811406 Bacteria Bacteria 56.6 1.25e-7   NR HYL41425.1 2811406 g540520 i0 82.4 0.675496688741722 34 3 61.6 1 150 58 261 294 HYL41425.1 molybdopterin cofactor-binding domain-containing protein [Candidatus Binatus sp.] diamond 102 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.
27582879 27582879 PRJNA529241_P_NODE_195404_length_173_cov_6.566176_g193082_i0 PRJNA529241 195404 173 6.566176 11.35948448 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 52 7.68e-6   NR MFN2427512.1 2838779 g193082 i0 92 1.69942196531792 25 2 43.4 0 2 76 319 343 MFN2427512.1 NAD(P)H-dependent flavin oxidoreductase [Candidatus Binatia bacterium] diamond 294 52 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30582767 30582767 PRJNA529241_P_NODE_290673_length_173_cov_3.683824_g288351_i0 PRJNA529241 290673 173 3.683824 6.37301552 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 42.4 0.0199   NR HZD11726.1 2838779 g288351 i0 76 0.433526011560694 25 6 43.4 0 172 98 273 297 HZD11726.1 hypothetical protein [Candidatus Binatia bacterium] diamond 75 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31088593 31088593 PRJNA529241_P_NODE_550615_length_151_cov_2.710526_g548293_i0 PRJNA529241 550615 151 2.710526 4.09289426 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 44.7 0.00223   NR HEX5019871.1 2838779 g548293 i0 72 0.496688741721854 25 7 49.7 0 76 2 45 69 HEX5019871.1 D-2-hydroxyacid dehydrogenase [Candidatus Binatia bacterium] diamond 75 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31721052 31721052 PRJNA529241_P_NODE_585377_length_150_cov_3.070796_g583055_i0 PRJNA529241 585377 150 3.070796 4.606194 Candidatus Binatota bacterium 2528255 Bacteria Bacteria 49.7 3.63e-5   NR MDP9131110.1 2528255 g583055 i0 84 2 25 4 50 0 2 76 365 389 MDP9131110.1 IS110 family transposase [Candidatus Binatota bacterium] diamond 300 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota         Candidatus Binatota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;