RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

59 rows where analysis = "diamond", bioproject = "PRJNA529241" and tax_phylum = "Campylobacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Campylobacterota · 59 ✖

tax_kingdom 1

bioproject 1

  • PRJNA529241 · 59 ✖

analysis 1

  • diamond · 59 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15803502 15803502 PRJNA529241_P_NODE_425853_length_166_cov_0.906977_g423531_i0 PRJNA529241 425853 166 0.906977 1.50558182 root 1 Root_unresolved Root_unresolved 56.2 4.3e-8   NR GAA8857246.1 210 g423531 i0 50.9 1.98795180722892 55 26 97.6 1 4 165 22 76 GAA8857246.1 hypothetical protein Kyoto154A_2180 [Helicobacter pylori] diamond 330 56.2 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
26760926 26760926 PRJNA529241_P_NODE_588581_length_150_cov_1.035398_g586259_i0 PRJNA529241 588581 150 1.035398 1.553097 Aliarcobacter cryaerophilus 28198 Bacteria Bacteria 47 2.8e-5   NR WP_222860981.1 28198 g586259 i0 60.6 0.66 33 13 66 0 150 52 19 51 WP_222860981.1 hypothetical protein, partial [Aliarcobacter cryaerophilus] diamond 99 47 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Arcobacteraceae Aliarcobacter Aliarcobacter cryaerophilus
26776307 26776307 PRJNA529241_P_NODE_113921_length_207_cov_1.147059_g111599_i0 PRJNA529241 113921 207 1.147059 2.37441213 root 1 Root_unresolved Root_unresolved 93.6 2.98e-20   NR WP_147496856.1 198 g111599 i0 60.9 5.63768115942029 64 25 92.8 0 13 204 491 554 WP_147496856.1 hypothetical protein [Campylobacter hyointestinalis] diamond 1167 93.6 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter hyointestinalis
26887804 26887804 PRJNA529241_P_NODE_160261_length_181_cov_1.083333_g157939_i0 PRJNA529241 160261 181 1.083333 1.96083273 Helicobacter pylori 210 Bacteria Bacteria 39.3 0.0402   NR GAA8697549.1 210 g157939 i0 51.1 0.74585635359116 45 14 61.3 2 180 70 9 53 GAA8697549.1 hypothetical protein Kyoto145A_2920 [Helicobacter pylori] diamond 135 39.3 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27123944 27123944 PRJNA529241_P_NODE_501202_length_151_cov_4.903509_g498880_i0 PRJNA529241 501202 151 4.903509 7.40429859 Bacteria 2 Bacteria Bacteria 53.5 1.3e-7   NR MDN2783561.1 197 g498880 i0 46.4 3.27814569536424 84 5 87.4 1 18 149 1 84 MDN2783561.1 hypothetical protein [Campylobacter jejuni] diamond 495 53.5 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter jejuni
27298807 27298807 PRJNA529241_P_NODE_435523_length_162_cov_1.560000_g433201_i0 PRJNA529241 435523 162 1.56 2.5272 Helicobacter pylori 210 Bacteria Bacteria 50.8 1.31e-6   NR GAA9174405.1 210 g433201 i0 76.7 0.555555555555556 30 7 55.6 0 72 161 20 49 GAA9174405.1 hypothetical protein Kyoto190A_6010 [Helicobacter pylori] diamond 90 50.8 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27362249 27362249 PRJNA529241_P_NODE_445903_length_158_cov_1.611570_g443581_i0 PRJNA529241 445903 158 1.61157 2.5462806 Helicobacter pylori 210 Bacteria Bacteria 39.3 0.0364   NR GAA9090268.1 210 g443581 i0 54.3 0.664556962025316 35 15 64.6 1 52 153 20 54 GAA9090268.1 hypothetical protein Kyoto184A_08410 [Helicobacter pylori] diamond 105 39.3 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27393634 27393634 PRJNA529241_P_NODE_171823_length_176_cov_1.122302_g169501_i0 PRJNA529241 171823 176 1.122302 1.97525152 Helicobacter pylori 210 Bacteria Bacteria 48.9 8.62e-6   NR GAA6904105.1 210 g169501 i0 64.5 0.528409090909091 31 11 52.8 0 93 1 26 56 GAA6904105.1 hypothetical protein Kyoto207A_2120 [Helicobacter pylori] diamond 93 48.9 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27425405 27425405 PRJNA529241_P_NODE_522903_length_151_cov_3.842105_g520581_i0 PRJNA529241 522903 151 3.842105 5.80157855 uncultured Campylobacter sp. 218934 Bacteria Bacteria 51.2 1.09e-5   NR WP_299189845.1 218934 g520581 i0 92 0.496688741721854 25 2 49.7 0 75 1 529 553 WP_299189845.1 DnaJ-like cysteine-rich domain-containing protein [uncultured Campylobacter sp.] diamond 75 51.2 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter uncultured Campylobacter sp.
27488262 27488262 PRJNA529241_P_NODE_162443_length_180_cov_1.363636_g160121_i0 PRJNA529241 162443 180 1.363636 2.4545448 Helicobacter pylori 210 Bacteria Bacteria 52 3.36e-7   NR GAA8856488.1 210 g160121 i0 71.1 0.633333333333333 38 10 61.7 1 1 111 4 41 GAA8856488.1 hypothetical protein Kyoto154A_2050 [Helicobacter pylori] diamond 114 52 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27535040 27535040 PRJNA529241_P_NODE_334703_length_173_cov_3.095588_g332381_i0 PRJNA529241 334703 173 3.095588 5.35536724 Bacteria 2 Bacteria Bacteria 57.4 4.18e-8   NR WP_366208357.1 28197 g332381 i0 100 3.03468208092486 25 0 43.4 0 1 75 76 100 WP_366208357.1 hypothetical protein [Aliarcobacter butzleri] diamond 525 57.4 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Arcobacteraceae Aliarcobacter Aliarcobacter butzleri
27646357 27646357 PRJNA529241_P_NODE_415364_length_170_cov_0.864662_g413042_i0 PRJNA529241 415364 170 0.864662 1.4699254 Helicobacter pylori 210 Bacteria Bacteria 40.4 0.0113   NR GAA8829370.1 210 g413042 i0 50 0.811764705882353 46 22 81.2 1 143 6 6 50 GAA8829370.1 hypothetical protein Kyoto149A_4590 [Helicobacter pylori] diamond 138 40.4 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27678070 27678070 PRJNA529241_P_NODE_551884_length_151_cov_1.368421_g549562_i0 PRJNA529241 551884 151 1.368421 2.06631571 Helicobacter pylori 210 Bacteria Bacteria 43.5 0.00116   NR GAA8829007.1 210 g549562 i0 56.8 0.735099337748344 37 16 73.5 0 23 133 53 89 GAA8829007.1 hypothetical protein Kyoto149A_4520 [Helicobacter pylori] diamond 111 43.5 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27741198 27741198 PRJNA529241_P_NODE_411884_length_171_cov_1.455224_g409562_i0 PRJNA529241 411884 171 1.455224 2.48843304 Helicobacter pylori 210 Bacteria Bacteria 65.1 3.49e-12   NR GAA9174405.1 210 g409562 i0 72.1 1.49122807017544 43 12 75.4 0 164 36 29 71 GAA9174405.1 hypothetical protein Kyoto190A_6010 [Helicobacter pylori] diamond 255 65.1 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27804114 27804114 PRJNA529241_P_NODE_25264_length_417_cov_25.021053_g22973_i0 PRJNA529241 25264 417 25.021053 104.33779101 Helicobacter pylori 210 Bacteria Bacteria 42.4 0.0321   NR GAA9209418.1 210 g22973 i0 68.2 0.158273381294964 22 7 15.8 0 287 352 1 22 GAA9209418.1 hypothetical protein Kyoto198A_1710 [Helicobacter pylori] diamond 66 42.4 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27804171 27804171 PRJNA529241_P_NODE_446664_length_158_cov_0.966942_g444342_i0 PRJNA529241 446664 158 0.966942 1.52776836 Helicobacter pylori 210 Bacteria Bacteria 39.3 0.0371   NR GAA9252043.1 210 g444342 i0 51 0.968354430379747 51 24 94.9 1 153 4 1 51 GAA9252043.1 hypothetical protein Kyoto199A_2390 [Helicobacter pylori] diamond 153 39.3 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27804172 27804172 PRJNA529241_P_NODE_449664_length_157_cov_0.975000_g447342_i0 PRJNA529241 449664 157 0.975 1.53075 Aliarcobacter cryaerophilus 28198 Bacteria Bacteria 50.4 1.29e-6   NR WP_222860981.1 28198 g447342 i0 61.1 0.687898089171974 36 14 68.8 0 50 157 21 56 WP_222860981.1 hypothetical protein, partial [Aliarcobacter cryaerophilus] diamond 108 50.4 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Arcobacteraceae Aliarcobacter Aliarcobacter cryaerophilus
27804187 27804187 PRJNA529241_P_NODE_490344_length_151_cov_5.728070_g488022_i0 PRJNA529241 490344 151 5.72807 8.6493857 Campylobacterales bacterium 2268180 Bacteria Bacteria 42 0.0164   NR HOI84343.1 2268180 g488022 i0 68 1.09271523178808 25 8 49.7 0 3 77 26 50 HOI84343.1 PAS domain S-box protein [Campylobacterales bacterium] diamond 165 42 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales     Campylobacterales bacterium
27961892 27961892 PRJNA529241_P_NODE_426185_length_165_cov_8.320312_g423863_i0 PRJNA529241 426185 165 8.320312 13.7285148 Helicobacter pylori 210 Bacteria Bacteria 41.2 0.00509   NR GAA9084443.1 210 g423863 i0 100 0.345454545454545 19 0 34.5 0 121 65 34 52 GAA9084443.1 hypothetical protein Kyoto184A_07760 [Helicobacter pylori] diamond 57 41.2 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
27993644 27993644 PRJNA529241_P_NODE_573905_length_150_cov_4.159292_g571583_i0 PRJNA529241 573905 150 4.159292 6.238938 uncultured Campylobacter sp. 218934 Bacteria Bacteria 53.1 2.15e-6   NR WP_298962689.1 218934 g571583 i0 88.5 0.52 26 3 52 0 149 72 337 362 WP_298962689.1 glycosyltransferase family 4 protein [uncultured Campylobacter sp.] diamond 78 53.1 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter uncultured Campylobacter sp.
27993664 27993664 PRJNA529241_P_NODE_77065_length_243_cov_1.135922_g74743_i0 PRJNA529241 77065 243 1.135922 2.76029046 Helicobacter pylori 210 Bacteria Bacteria 44.3 0.00103   NR GAA9020730.1 210 g74743 i0 76 0.308641975308642 25 6 30.9 0 103 177 24 48 GAA9020730.1 hypothetical protein Kyoto181A_7750 [Helicobacter pylori] diamond 75 44.3 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
28419245 28419245 PRJNA529241_P_NODE_220686_length_173_cov_5.308824_g218364_i0 PRJNA529241 220686 173 5.308824 9.18426552 Pseudomonadati 3379134 Bacteria Bacteria 95.1 4.209999999999999e-24   NR WP_209410676.1 197 g218364 i0 86 1.97687861271676 57 4 98.8 1 171 1 14 66 WP_209410676.1 acyl carrier protein, partial [Campylobacter jejuni] diamond 342 95.1 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter jejuni
28561877 28561877 PRJNA529241_P_NODE_276047_length_173_cov_3.911765_g273725_i0 PRJNA529241 276047 173 3.911765 6.76735345 Desulfurellales bacterium 2482794 Bacteria Bacteria 58.5 9.35e-10   NR TXH49158.1 2482794 g273725 i0 100 0.416184971098266 24 0 41.6 0 100 171 2 25 TXH49158.1 MAG: hypothetical protein E6Q97_23215 [Desulfurellales bacterium] diamond 72 58.5 1 Bacteria   Pseudomonadati Campylobacterota Desulfurellia Desulfurellales     Desulfurellales bacterium
28656685 28656685 PRJNA529241_P_NODE_501267_length_151_cov_4.903509_g498945_i0 PRJNA529241 501267 151 4.903509 7.40429859 Helicobacter pylori 210 Bacteria Bacteria 63.5 1.8e-10   NR GAA9038606.1 210 g498945 i0 69.4 0.973509933774834 49 10 87.4 1 8 139 32 80 GAA9038606.1 hypothetical protein Kyoto184A_01320 [Helicobacter pylori] diamond 147 63.5 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
29113774 29113774 PRJNA529241_P_NODE_178188_length_174_cov_1.007299_g175866_i0 PRJNA529241 178188 174 1.007299 1.75270026 root 1 Root_unresolved Root_unresolved 42.7 0.00208   NR GAA6937476.1 210 g175866 i0 66.7 4.5 30 10 51.7 0 104 15 7 36 GAA6937476.1 hypothetical protein Kyoto207A_5180 [Helicobacter pylori] diamond 783 42.7 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
29208618 29208618 PRJNA529241_P_NODE_457709_length_154_cov_1.333333_g455387_i0 PRJNA529241 457709 154 1.333333 2.05333282 root 1 Root_unresolved Root_unresolved 40 0.0241   NR GAA8909605.1 210 g455387 i0 58.1 1.32467532467532 31 13 60.4 0 2 94 51 81 GAA8909605.1 hypothetical protein Kyoto166A_1730 [Helicobacter pylori] diamond 204 40 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
29287906 29287906 PRJNA529241_P_NODE_464629_length_152_cov_5.886957_g462307_i0 PRJNA529241 464629 152 5.886957 8.94817464 Helicobacter pylori 210 Bacteria Bacteria 40.8 0.013   NR GAA8950685.1 210 g462307 i0 68 0.493421052631579 25 8 49.3 0 151 77 62 86 GAA8950685.1 hypothetical protein Kyoto181A_1590 [Helicobacter pylori] diamond 75 40.8 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
29351215 29351215 PRJNA529241_P_NODE_35429_length_344_cov_10.504886_g33110_i0 PRJNA529241 35429 344 10.504886 36.13680784 Helicobacter pylori 210 Bacteria Bacteria 44.7 0.00459   NR GAA9106824.1 210 g33110 i0 81.8 0.191860465116279 22 4 19.2 0 318 253 1 22 GAA9106824.1 hypothetical protein Kyoto184A_09650 [Helicobacter pylori] diamond 66 44.7 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
29414185 29414185 PRJNA529241_P_NODE_33629_length_354_cov_10.343849_g31311_i0 PRJNA529241 33629 354 10.343849 36.61722546 Helicobacter pylori 210 Bacteria Bacteria 44.7 0.00496   NR GAA9106824.1 210 g31311 i0 81.8 0.186440677966102 22 4 18.6 0 328 263 1 22 GAA9106824.1 hypothetical protein Kyoto184A_09650 [Helicobacter pylori] diamond 66 44.7 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
29414190 29414190 PRJNA529241_P_NODE_345009_length_173_cov_2.933824_g342687_i0 PRJNA529241 345009 173 2.933824 5.07551552 Helicobacter pylori 210 Bacteria Bacteria 43.5 0.00101   NR GAA6988816.1 210 g342687 i0 87.5 0.832369942196532 24 3 41.6 0 4 75 15 38 GAA6988816.1 hypothetical protein Kyoto211A_4340 [Helicobacter pylori] diamond 144 43.5 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
29508950 29508950 PRJNA529241_P_NODE_429090_length_164_cov_6.346457_g426768_i0 PRJNA529241 429090 164 6.346457 10.40818948 Helicobacter pylori 210 Bacteria Bacteria 50.4 1.94e-6   NR GAA6820949.1 210 g426768 i0 77.8 0.49390243902439 27 6 49.4 0 1 81 16 42 GAA6820949.1 hypothetical protein Kyoto200A_3790 [Helicobacter pylori] diamond 81 50.4 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
29572038 29572038 PRJNA529241_P_NODE_436990_length_161_cov_5.701613_g434668_i0 PRJNA529241 436990 161 5.701613 9.17959693 Helicobacter pylori 210 Bacteria Bacteria 41.2 0.00659   NR GAA9231934.1 210 g434668 i0 60.6 0.614906832298137 33 13 61.5 0 137 39 7 39 GAA9231934.1 hypothetical protein Kyoto198A_4860 [Helicobacter pylori] diamond 99 41.2 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
29572052 29572052 PRJNA529241_P_NODE_46930_length_298_cov_1.344828_g44608_i0 PRJNA529241 46930 298 1.344828 4.00758744 Campylobacter coli 195 Bacteria Bacteria 79 1.33e-14   NR ELH4668220.1 195 g44608 i0 43.8 0.966442953020134 96 44 96.6 2 293 6 351 436 ELH4668220.1 hypothetical protein [Campylobacter coli] diamond 288 79 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter coli
29744955 29744955 PRJNA529241_P_NODE_81250_length_237_cov_7.010000_g78928_i0 PRJNA529241 81250 237 7.01 16.6137 Pseudomonadati 3379134 Bacteria Bacteria 66.6 2.4e-12   NR MCH3868474.1 197 g78928 i0 100 0.835443037974684 33 0 41.8 0 100 2 49 81 MCH3868474.1 hypothetical protein [Campylobacter jejuni] diamond 198 66.6 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter jejuni
29761469 29761469 PRJNA529241_P_NODE_368051_length_173_cov_2.691176_g365729_i0 PRJNA529241 368051 173 2.691176 4.65573448 Campylobacter ureolyticus 827 Bacteria Bacteria 49.3 7.03e-5   NR WP_258299313.1 827 g365729 i0 92 0.433526011560694 25 2 43.4 0 2 76 102 126 WP_258299313.1 hypothetical protein, partial [Campylobacter ureolyticus] diamond 75 49.3 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter ureolyticus
29888109 29888109 PRJNA529241_P_NODE_48071_length_294_cov_5.774319_g45749_i0 PRJNA529241 48071 294 5.774319 16.97649786 Helicobacter pylori 210 Bacteria Bacteria 44.7 0.00284   NR GAA9106824.1 210 g45749 i0 81.8 0.224489795918367 22 4 22.4 0 268 203 1 22 GAA9106824.1 hypothetical protein Kyoto184A_09650 [Helicobacter pylori] diamond 66 44.7 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
30077247 30077247 PRJNA529241_P_NODE_149952_length_185_cov_18.060811_g147630_i0 PRJNA529241 149952 185 18.060811 33.41250035 Helicobacter pylori 210 Bacteria Bacteria 76.6 1.07e-16   NR GAA6775601.1 210 g147630 i0 82.2 0.72972972972973 45 7 71.4 1 24 155 1 45 GAA6775601.1 hypothetical protein Kyoto199A_4750 [Helicobacter pylori] diamond 135 76.6 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
30077333 30077333 PRJNA529241_P_NODE_433752_length_163_cov_0.928571_g431430_i0 PRJNA529241 433752 163 0.928571 1.51357073 Helicobacter pylori 210 Bacteria Bacteria 43.5 8.26e-4   NR GAA9062696.1 210 g431430 i0 59 0.717791411042945 39 15 71.8 1 6 122 8 45 GAA9062696.1 hypothetical protein Kyoto184A_05270 [Helicobacter pylori] diamond 117 43.5 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
30203565 30203565 PRJNA529241_P_NODE_263652_length_173_cov_4.147059_g261330_i0 PRJNA529241 263652 173 4.147059 7.17441207 uncultured Campylobacter sp. 218934 Bacteria Bacteria 50.4 2.17e-5   NR WP_295143622.1 218934 g261330 i0 92 0.433526011560694 25 2 43.4 0 2 76 54 78 WP_295143622.1 pseudaminic acid cytidylyltransferase [uncultured Campylobacter sp.] diamond 75 50.4 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter uncultured Campylobacter sp.
30299097 30299097 PRJNA529241_P_NODE_407812_length_172_cov_1.000000_g405490_i0 PRJNA529241 407812 172 1 1.72 Helicobacter pylori 210 Bacteria Bacteria 43.1 9.75e-4   NR GAA8706462.1 210 g405490 i0 65.4 0.453488372093023 26 9 45.3 0 149 72 23 48 GAA8706462.1 hypothetical protein Kyoto145A_3610 [Helicobacter pylori] diamond 78 43.1 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
30425477 30425477 PRJNA529241_P_NODE_433513_length_163_cov_1.166667_g431191_i0 PRJNA529241 433513 163 1.166667 1.90166721 Helicobacter pylori 210 Bacteria Bacteria 57 7.94e-9   NR GAA9044369.1 210 g431191 i0 61.5 0.717791411042945 39 15 71.8 0 47 163 56 94 GAA9044369.1 hypothetical protein Kyoto184A_02810 [Helicobacter pylori] diamond 117 57 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
30425523 30425523 PRJNA529241_P_NODE_580873_length_150_cov_3.424779_g578551_i0 PRJNA529241 580873 150 3.424779 5.1371685 Campylobacterota bacterium 2026809 Bacteria Bacteria 87 1.46e-20   NR GHS90013.1 2026809 g578551 i0 77.8 1.26 63 0 98 1 149 3 41 103 GHS90013.1 hypothetical protein FACS189487_11250 [Campylobacterota bacterium] diamond 189 87 1 Bacteria   Pseudomonadati Campylobacterota         Campylobacterota bacterium
30519789 30519789 PRJNA529241_P_NODE_208473_length_173_cov_5.823529_g206151_i0 PRJNA529241 208473 173 5.823529 10.07470517 Helicobacter typhlonius 76936 Bacteria Bacteria 52 3.11e-7   NR WP_334090172.1 76936 g206151 i0 100 1.30057803468208 25 0 43.4 0 172 98 19 43 WP_334090172.1 30S ribosomal protein S13, partial [Helicobacter typhlonius] diamond 225 52 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter typhlonius
30614492 30614492 PRJNA529241_P_NODE_414073_length_170_cov_3.593985_g411751_i0 PRJNA529241 414073 170 3.593985 6.1097745 Helicobacter pylori 210 Bacteria Bacteria 48.5 4.55e-5   NR GAA8908272.1 210 g411751 i0 47.2 1.5 53 27 91.8 1 6 161 43 95 GAA8908272.1 hypothetical protein Kyoto166A_1320 [Helicobacter pylori] diamond 255 48.5 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
30709242 30709242 PRJNA529241_P_NODE_175454_length_174_cov_5.489051_g173132_i0 PRJNA529241 175454 174 5.489051 9.55094874 Helicobacter pylori 210 Bacteria Bacteria 54.3 3.39e-8   NR GAA8993091.1 210 g173132 i0 95.7 0.396551724137931 23 1 39.7 0 3 71 23 45 GAA8993091.1 hypothetical protein Kyoto181A_6120 [Helicobacter pylori] diamond 69 54.3 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
30772744 30772744 PRJNA529241_P_NODE_405334_length_172_cov_3.266667_g403012_i0 PRJNA529241 405334 172 3.266667 5.61866724 Campylobacterales bacterium 2268180 Bacteria Bacteria 46.6 6.31e-4   NR MCX6062309.1 2268180 g403012 i0 31.2 3.24418604651163 93 26 95.9 1 165 1 250 342 MCX6062309.1 efflux transporter outer membrane subunit [Campylobacterales bacterium] diamond 558 46.6 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales     Campylobacterales bacterium
31198073 31198073 PRJNA529241_P_NODE_443515_length_159_cov_1.278689_g441193_i0 PRJNA529241 443515 159 1.278689 2.03311551 root 1 Root_unresolved Root_unresolved 46.2 3.59e-4   NR GAA9250408.1 210 g441193 i0 57.6 21.1698113207547 33 14 62.3 0 59 157 10 42 GAA9250408.1 hypothetical protein Kyoto199A_2030 [Helicobacter pylori] diamond 3366 46.6 0.991416309012876 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
31626017 31626017 PRJNA529241_P_NODE_313136_length_173_cov_3.345588_g310814_i0 PRJNA529241 313136 173 3.345588 5.78786724 Campylobacter sp. 19-13652 2840180 Bacteria Bacteria 50.1 3.71e-5   NR WP_221253874.1 2840180 g310814 i0 100 24.8323699421965 22 0 38.2 0 74 9 176 197 WP_221253874.1 NAD-dependent epimerase [Campylobacter sp. 19-13652] diamond 4296 50.1 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter sp. 19-13652
31657481 31657481 PRJNA529241_P_NODE_149277_length_186_cov_2.879195_g146955_i0 PRJNA529241 149277 186 2.879195 5.3553027 Helicobacter pylori 210 Bacteria Bacteria 47.4 2.34e-4   NR GAA9039287.1 210 g146955 i0 71.4 0.903225806451613 28 8 45.2 0 184 101 48 75 GAA9039287.1 hypothetical protein Kyoto184A_01650 [Helicobacter pylori] diamond 168 47.4 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
31721006 31721006 PRJNA529241_P_NODE_435997_length_162_cov_1.248000_g433675_i0 PRJNA529241 435997 162 1.248 2.02176 Helicobacter pylori 210 Bacteria Bacteria 41.2 0.00488   NR GAA9085911.1 210 g433675 i0 54.8 0.574074074074074 31 14 57.4 0 135 43 13 43 GAA9085911.1 hypothetical protein Kyoto184A_07950 [Helicobacter pylori] diamond 93 41.2 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
31752434 31752434 PRJNA529241_P_NODE_118137_length_204_cov_1.167665_g115815_i0 PRJNA529241 118137 204 1.167665 2.3820366 Helicobacter pylori 210 Bacteria Bacteria 41.2 0.013   NR GAA6904105.1 210 g115815 i0 52.6 0.558823529411765 38 18 55.9 0 12 125 34 71 GAA6904105.1 hypothetical protein Kyoto207A_2120 [Helicobacter pylori] diamond 114 41.2 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
31784034 31784034 PRJNA529241_P_NODE_139997_length_191_cov_1.266234_g137675_i0 PRJNA529241 139997 191 1.266234 2.41850694 Helicobacter pylori 210 Bacteria Bacteria 40 0.032   NR GAA9197671.1 210 g137675 i0 84.2 0.298429319371728 19 3 29.8 0 82 138 9 27 GAA9197671.1 hypothetical protein Kyoto193A_4420 [Helicobacter pylori] diamond 57 40 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
31878948 31878948 PRJNA529241_P_NODE_305697_length_173_cov_3.441176_g303375_i0 PRJNA529241 305697 173 3.441176 5.95323448 Arcobacter sp. 1872629 Bacteria Bacteria 43.1 0.00676   NR PIF04336.1 1872629 g303375 i0 77.3 0.780346820809249 22 5 38.2 0 67 2 125 146 PIF04336.1 MAG: hypothetical protein CSA86_02190 [Arcobacter sp.] diamond 135 43.1 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Arcobacteraceae Arcobacter Arcobacter sp.
32037461 32037461 PRJNA529241_P_NODE_67098_length_256_cov_16.771689_g64776_i0 PRJNA529241 67098 256 16.771689 42.93552384 Helicobacter pylori 210 Bacteria Bacteria 53.1 1.03e-6   NR GAA9038855.1 210 g64776 i0 100 0.5390625 23 0 27 0 255 187 22 44 GAA9038855.1 hypothetical protein Kyoto184A_01470 [Helicobacter pylori] diamond 138 53.1 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
32068949 32068949 PRJNA529241_P_NODE_436298_length_162_cov_0.936000_g433976_i0 PRJNA529241 436298 162 0.936 1.51632 Helicobacter pylori 210 Bacteria Bacteria 47.4 1.12e-4   NR GAA8908272.1 210 g433976 i0 53.7 1.51851851851852 41 16 75.9 1 124 2 57 94 GAA8908272.1 hypothetical protein Kyoto166A_1320 [Helicobacter pylori] diamond 246 47.4 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
32084114 32084114 PRJNA529241_P_NODE_143978_length_189_cov_0.940789_g141656_i0 PRJNA529241 143978 189 0.940789 1.77809121 root 1 Root_unresolved Root_unresolved 45.8 0.00124   NR GAA9038731.1 210 g141656 i0 47.1 2.42857142857143 51 23 74.6 2 177 37 33 83 GAA9038731.1 hypothetical protein Kyoto184A_01380 [Helicobacter pylori] diamond 459 46.2 0.991341991341991 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
32337550 32337550 PRJNA529241_P_NODE_266639_length_173_cov_4.088235_g264317_i0 PRJNA529241 266639 173 4.088235 7.07264655 root 1 Root_unresolved Root_unresolved 47 1.01e-4   NR WP_341549733.1 197 g264317 i0 80 42.0520231213873 25 5 43.4 0 76 2 20 44 WP_341549733.1 reverse transcriptase domain-containing protein, partial [Campylobacter jejuni] diamond 7275 47.4 0.991561181434599 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter jejuni
32400744 32400744 PRJNA529241_P_NODE_330599_length_173_cov_3.139706_g328277_i0 PRJNA529241 330599 173 3.139706 5.43169138 Bacteria 2 Bacteria Bacteria 52.4 4.92e-6   NR GAA8851786.1 210 g328277 i0 91.7 1.66473988439306 24 2 41.6 0 74 3 122 145 GAA8851786.1 F0F1 ATP synthase subunit A [Helicobacter pylori] diamond 288 52.8 0.992424242424242 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
32669623 32669623 PRJNA529241_P_NODE_588100_length_150_cov_1.380531_g585778_i0 PRJNA529241 588100 150 1.380531 2.0707965 Helicobacter pylori 210 Bacteria Bacteria 43.9 3.8e-4   NR GAA8706462.1 210 g585778 i0 44.2 0.86 43 23 84 1 147 22 8 50 GAA8706462.1 hypothetical protein Kyoto145A_3610 [Helicobacter pylori] diamond 129 43.9 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;