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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA529241" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 8 ✖

bioproject 1

  • PRJNA529241 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3049787 3049787 PRJNA529241_P_NODE_160363_length_181_cov_1.083333_g158041_i0 PRJNA529241 160363 181 1.083333 1.96083273 Coccomyxa 41891 Plants Plants 121 2.2799999999999998e-32   NR XP_005646819.1 574566 g158041 i0 95 9.94475138121547 60 3 99.4 0 180 1 188 247 XP_005646819.1 ribosomal protein L8 component of cytosolic 80S ribosome and 60S large subunit [Coccomyxa subellipsoidea C-169] diamond 1800 121 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
26902994 26902994 PRJNA529241_P_NODE_366581_length_173_cov_2.698529_g364259_i0 PRJNA529241 366581 173 2.698529 4.66845517 Eukaryota 2759 Plants Plants 47.4 2.93e-4   NR KAK9918745.1 248742 g364259 i0 91.3 8.0635838150289 23 2 39.9 0 100 168 168 190 KAK9918745.1 hypothetical protein WJX75_006512 [Coccomyxa subellipsoidea] diamond 1395 47.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27282402 27282402 PRJNA529241_P_NODE_551103_length_151_cov_2.596491_g548781_i0 PRJNA529241 551103 151 2.596491 3.92070141 Chlorophyceae 3166 Plants Plants 48.5 5.46e-5   NR KXZ45106.1 33097 g548781 i0 60 1.1523178807947 30 12 59.6 0 150 61 71 100 KXZ45106.1 hypothetical protein GPECTOR_58g555 [Gonium pectorale] diamond 174 48.9 0.991820040899796 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
27756294 27756294 PRJNA529241_P_NODE_279964_length_173_cov_3.845588_g277642_i0 PRJNA529241 279964 173 3.845588 6.65286724 root 1 Root_unresolved Root_unresolved 42.4 0.02   NR KAI8469007.1 39955 g277642 i0 66.7 1.21387283236994 24 8 41.6 0 168 97 206 229 KAI8469007.1 MAG: major facilitator superfamily transporter [Monoraphidium minutum] diamond 210 42.7 0.992974238875878 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
29319452 29319452 PRJNA529241_P_NODE_167209_length_178_cov_1.078014_g164887_i0 PRJNA529241 167209 178 1.078014 1.91886492 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 39.7 0.0423   NR KAF6261890.1 2650976 g164887 i0 42.9 0.471910112359551 28 16 47.2 0 74 157 32 59 KAF6261890.1 hypothetical protein COO60DRAFT_1499080 [Scenedesmus sp. NREL 46B-D3] diamond 84 39.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
30172144 30172144 PRJNA529241_P_NODE_244052_length_173_cov_4.573529_g241730_i0 PRJNA529241 244052 173 4.573529 7.91220517 Trebouxia sp. C 2796353 Plants Plants 53.9 1.62e-6   NR KAL3135587.1 3373144 g241730 i0 60.4 2.4971098265896 48 16 83.2 1 1 144 88 132 KAL3135587.1 hypothetical protein ABBQ38_006067 [Trebouxia sp. C0009 RCD-2024] diamond 432 53.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0009 RCD-2024
30661371 30661371 PRJNA529241_P_NODE_420153_length_168_cov_1.190840_g417831_i0 PRJNA529241 420153 168 1.19084 2.0006112 Chlorophyta 3041 Plants Plants 71.2 1.61e-14   NR KAF5837181.1 3046 g417831 i0 77.3 2.25 44 10 78.6 0 168 37 42 85 KAF5837181.1 60S ribosomal protein L38 [Dunaliella salina] diamond 378 71.6 0.994413407821229 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31025437 31025437 PRJNA529241_P_NODE_374755_length_173_cov_2.625000_g372433_i0 PRJNA529241 374755 173 2.625 4.54125 Chlamydomonas incerta 51695 Plants Plants 45.8 0.00118   NR KAG2426295.1 51695 g372433 i0 54.5 0.763005780346821 44 18 72.8 1 171 46 141 184 KAG2426295.1 hypothetical protein HXX76_013052 [Chlamydomonas incerta] diamond 132 45.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;