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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA529241" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA529241 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27077526 27077526 PRJNA529241_P_NODE_455162_length_155_cov_0.991525_g452840_i0 PRJNA529241 455162 155 0.991525 1.53686375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.8 2.65e-7   NR XP_004341947.1 1257118 g452840 i0 55.8 0.832258064516129 43 19 83.2 0 1 129 692 734 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 129 55.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27077559 27077559 PRJNA529241_P_NODE_551622_length_151_cov_1.710526_g549300_i0 PRJNA529241 551622 151 1.710526 2.58289426 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 51.2 1.02e-5   NR XP_004337717.1 1257118 g549300 i0 55.1 0.973509933774834 49 15 97.4 1 4 150 121 162 XP_004337717.1 ribosomal L18p/L5e family [Acanthamoeba castellanii str. Neff] diamond 147 51.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27772680 27772680 PRJNA529241_P_NODE_391044_length_173_cov_2.397059_g388722_i0 PRJNA529241 391044 173 2.397059 4.14691207 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 50.4 9.2e-6   NR YP_003540828.1 5778 g388722 i0 92 0.433526011560694 25 2 43.4 0 3 77 56 80 YP_003540828.1 ribosomal protein S11 [Vermamoeba vermiformis] diamond 75 50.4 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
28419250 28419250 PRJNA529241_P_NODE_300606_length_173_cov_3.536765_g298284_i0 PRJNA529241 300606 173 3.536765 6.11860345 Acytosteliales 2058181 Evosea other_Eukaryota 53.9 1.64e-6   NR XP_004362729.1 261658 g298284 i0 59.5 1.45664739884393 42 15 69.4 1 121 2 249 290 XP_004362729.1 putative CMF receptor CMFR1 [Cavenderia fasciculata] diamond 252 53.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
29067105 29067105 PRJNA529241_P_NODE_392488_length_173_cov_2.360294_g390166_i0 PRJNA529241 392488 173 2.360294 4.08330862 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 59.3 9.26e-9   NR PRP78360.1 1890364 g390166 i0 50.9 0.988439306358382 57 23 98.8 1 3 173 122 173 PRP78360.1 hypothetical protein PROFUN_13755 [Planoprotostelium fungivorum] diamond 171 59.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29319441 29319441 PRJNA529241_P_NODE_143689_length_189_cov_1.763158_g141367_i0 PRJNA529241 143689 189 1.763158 3.33236862 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.1 0.013   NR XP_004367870.1 1257118 g141367 i0 44.2 1.53968253968254 52 29 82.5 0 187 32 284 335 XP_004367870.1 ribosomal protein L4/L1 family [Acanthamoeba castellanii str. Neff] diamond 291 43.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29351242 29351242 PRJNA529241_P_NODE_438229_length_161_cov_1.258065_g435907_i0 PRJNA529241 438229 161 1.258065 2.02548465 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 91.3 9.86e-21   NR XP_644192.1 352472 g435907 i0 75.5 2.96273291925466 53 13 98.8 0 161 3 95 147 XP_644192.1 60S ribosomal protein L8 [Dictyostelium discoideum AX4] diamond 477 91.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
29603345 29603345 PRJNA529241_P_NODE_247870_length_173_cov_4.477941_g245548_i0 PRJNA529241 247870 173 4.477941 7.74683793 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 74.7 7.71e-14   NR KYQ94354.1 361077 g245548 i0 66.7 0.988439306358382 57 15 98.8 1 3 173 676 728 KYQ94354.1 hypothetical protein DLAC_04650 [Tieghemostelium lacteum] diamond 171 74.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29776651 29776651 PRJNA529241_P_NODE_346291_length_173_cov_2.911765_g343969_i0 PRJNA529241 346291 173 2.911765 5.03735345 root 1 Root_unresolved Root_unresolved 46.2 8.45e-4   NR PRP89446.1 1890364 g343969 i0 72 0.867052023121387 25 7 43.4 0 2 76 27 51 PRP89446.1 Diacetyl/L-xylulose reductase [Planoprotostelium fungivorum] diamond 150 46.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30488194 30488194 PRJNA529241_P_NODE_192933_length_173_cov_6.750000_g190611_i0 PRJNA529241 192933 173 6.75 11.6775 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62.8 1.24e-9   NR XP_004334568.1 1257118 g190611 i0 59 1.05780346820809 61 19 98.8 2 171 1 98 156 XP_004334568.1 paired amphipathic helix protein sin3, putative [Acanthamoeba castellanii str. Neff] diamond 183 62.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30677563 30677563 PRJNA529241_P_NODE_145613_length_188_cov_1.807947_g143291_i0 PRJNA529241 145613 188 1.807947 3.39894036 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.7 2.31e-19   NR XP_004336000.1 1257118 g143291 i0 67.7 3.95744680851064 62 20 98.9 0 2 187 28 89 XP_004336000.1 ribosomal protein S4, putative, partial [Acanthamoeba castellanii str. Neff] diamond 744 86.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31404846 31404846 PRJNA529241_P_NODE_394736_length_173_cov_2.279412_g392414_i0 PRJNA529241 394736 173 2.279412 3.94338276 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.1 0.0107   NR XP_004333480.1 1257118 g392414 i0 72 0.84971098265896 25 7 43.4 0 173 99 369 393 XP_004333480.1 uncharacterized protein ACA1_122080 [Acanthamoeba castellanii str. Neff] diamond 147 43.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;