contig_metadata
7 rows where analysis = "diamond" and bioproject = "PRJNA529224"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20240965 | 20240965 | PRJNA529224_S_NODE_296_length_337_cov_10.461039_g289_i0 | PRJNA529224 | 296 | 337 | 10.461039 | 35.25370143 | Comamonadaceae bacterium | 1871071 | Bacteria | Bacteria | 170 | 1.96e-49 | NR | MBH2043255.1 | 1871071 | g289 | i0 | 70.3 | 0.98813056379822 | 111 | 33 | 98.8 | 0 | 3 | 335 | 157 | 267 | MBH2043255.1 porin [Comamonadaceae bacterium] | diamond | 333 | 170 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonadaceae bacterium | |||
| 27425280 | 27425280 | PRJNA529224_S_NODE_1883_length_153_cov_8.379032_g1876_i0 | PRJNA529224 | 1883 | 153 | 8.379032 | 12.81991896 | Acinetobacter baumannii | 470 | Bacteria | Bacteria | 39.7 | 0.0237 | NR | RCU35012.1 | 470 | g1876 | i0 | 77.8 | 0.529411764705882 | 27 | 6 | 52.9 | 0 | 103 | 23 | 3 | 29 | RCU35012.1 hypothetical protein DVA76_18415, partial [Acinetobacter baumannii] | diamond | 81 | 39.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 29634850 | 29634850 | PRJNA529224_S_NODE_870_length_217_cov_7.441489_g863_i0 | PRJNA529224 | 870 | 217 | 7.441489 | 16.14803113 | Burkholderia sp. LMG 13 | 36773 | Bacteria | Bacteria | 145 | 3.03e-39 | NR | WP_205191387.1 | 2709306 | g863 | i0 | 100 | 0.967741935483871 | 70 | 0 | 96.8 | 0 | 4 | 213 | 479 | 548 | WP_205191387.1 NAD+ synthase [Burkholderia sp. LMG 13014] | diamond | 210 | 145 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia sp. LMG 13014 | ||
| 29824515 | 29824515 | PRJNA529224_S_NODE_1371_length_181_cov_13.447368_g1364_i0 | PRJNA529224 | 1371 | 181 | 13.447368 | 24.33973608 | Pseudomonas sp. | 306 | Bacteria | Bacteria | 41.6 | 0.0431 | NR | WP_288078465.1 | 306 | g1364 | i0 | 60.4 | 0.795580110497238 | 48 | 19 | 79.6 | 0 | 34 | 177 | 302 | 349 | WP_288078465.1 beta strand repeat-containing protein, partial [Pseudomonas sp.] | diamond | 144 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. | ||
| 31057201 | 31057201 | PRJNA529224_S_NODE_1375_length_181_cov_4.309211_g1368_i0 | PRJNA529224 | 1375 | 181 | 4.309211 | 7.79967191 | Vreelandella aquamarina | 77097 | Bacteria | Bacteria | 44.7 | 0.00337 | NR | WP_273682536.1 | 77097 | g1368 | i0 | 55.9 | 1.93922651933702 | 59 | 25 | 97.8 | 1 | 3 | 179 | 217 | 274 | WP_273682536.1 beta strand repeat-containing protein [Vreelandella aquamarina] | diamond | 351 | 44.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Vreelandella | Vreelandella aquamarina | ||
| 31341383 | 31341383 | PRJNA529224_S_NODE_936_length_212_cov_8.464481_g929_i0 | PRJNA529224 | 936 | 212 | 8.464481 | 17.94469972 | Burkholderia sp. LMG 13 | 36773 | Bacteria | Bacteria | 139 | 9.9e-39 | NR | WP_205191385.1 | 2709306 | g929 | i0 | 100 | 1.9811320754717 | 70 | 0 | 99.1 | 0 | 3 | 212 | 58 | 127 | WP_205191385.1 3-deoxy-8-phosphooctulonate synthase [Burkholderia sp. LMG 13014] | diamond | 420 | 139 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia sp. LMG 13014 | ||
| 31689205 | 31689205 | PRJNA529224_S_NODE_577_length_257_cov_14.000000_g570_i0 | PRJNA529224 | 577 | 257 | 14 | 35.98 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 90.9 | 1.88e-19 | NR | MCA1800798.1 | 2900548 | g570 | i0 | 63.5 | 0.992217898832685 | 85 | 31 | 99.2 | 0 | 257 | 3 | 158 | 242 | MCA1800798.1 hypothetical protein [Actinomycetota bacterium] | diamond | 255 | 90.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;