RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA527965" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA527965 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29871548 29871548 PRJNA527965_S_NODE_5351_length_162_cov_1.535433_g5268_i0 PRJNA527965 5351 162 1.535433 2.48740146 Viruses 10239 Viruses Viruses 80.9 4.4e-16   NR UNY42033.1 1955153 g5268 i0 72 4.62962962962963 50 14 92.6 0 161 12 1702 1751 UNY42033.1 MAG: polyprotein [Picornavirales sp.] diamond 750 80.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Picornavirales sp.
32795246 32795246 PRJNA527965_S_NODE_6320_length_150_cov_1.043478_g6237_i0 PRJNA527965 6320 150 1.043478 1.565217 Hubei macula-like virus 3 1922924 Viruses Viruses 97.1 7.6300000000000005e-22   NR APG77725.1 1922924 g6237 i0 100 0.98 49 0 98 0 3 149 431 479 APG77725.1 hypothetical protein, partial [Hubei macula-like virus 3] diamond 147 97.1 1 Viruses               Hubei macula-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;