RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA527965" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA527965 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26856127 26856127 PRJNA527965_S_NODE_6181_length_151_cov_1.620690_g6098_i0 PRJNA527965 6181 151 1.62069 2.4472419 Ogataea polymorpha 460523 Fungi Fungi 60.8 4.14e-9   NR KAG7902685.1 460523 g6098 i0 70.7 0.814569536423841 41 12 81.5 0 6 128 251 291 KAG7902685.1 hypothetical protein KL935_001593 [Ogataea polymorpha] diamond 123 60.8 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Ogataea Ogataea polymorpha
27772587 27772587 PRJNA527965_S_NODE_6144_length_151_cov_2.810345_g6061_i0 PRJNA527965 6144 151 2.810345 4.24362095 Aspergillus novofumigatus IBT 168 340412 Fungi Fungi 50.4 2.58e-6   NR PKX88305.1 1392255 g6061 i0 64.9 2.94039735099338 37 13 73.5 0 6 116 5 41 PKX88305.1 hypothetical protein P174DRAFT_75185 [Aspergillus novofumigatus IBT 16806] diamond 444 50.4 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus novofumigatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;